diff --git a/doc/Section_intro.html b/doc/Section_intro.html index acbe342747..446109b3da 100644 --- a/doc/Section_intro.html +++ b/doc/Section_intro.html @@ -138,6 +138,7 @@ commands)
Description:
Define a computation that calculates the temperature of a group of -nuclei and electrons using the electron force field, after subtracting -out a streaming velocity induced by the simulation box changing size -and/or shape, for example in a non-equilibrium MD (NEMD) simulation. -The size/shape change is induced by use of the fix -deform/eff command. A compute of this style is -created by the fix nvt/sllod/eff command to -compute the thermal temperature of atoms for thermostatting purposes. -A compute of this style can also be used by any command that computes -a temperature, e.g. thermo_modify, fix -npt/eff, etc. +nuclei and electrons in the electron force field +model, after subtracting out a streaming velocity induced by the +simulation box changing size and/or shape, for example in a +non-equilibrium MD (NEMD) simulation. The size/shape change is +induced by use of the fix deform/eff command. A +compute of this style is created by the fix +nvt/sllod/eff command to compute the thermal +temperature of atoms for thermostatting purposes. A compute of this +style can also be used by any command that computes a temperature, +e.g. thermo_modify, fix npt/eff, +etc.
The calculation performed by this compute is exactly like that described by the compute temp/deform diff --git a/doc/compute_temp_region_eff.html b/doc/compute_temp_region_eff.html index d240776a44..f6ac0182f3 100644 --- a/doc/compute_temp_region_eff.html +++ b/doc/compute_temp_region_eff.html @@ -26,9 +26,10 @@
Description:
Define a computation that calculates the temperature of a group of -nuclei and electrons wihtin a geometric region using the electron -force field. A compute of this style can be used by commands that -compute a temperature, e.g. thermo_modify. +nuclei and electrons in the electron force field +model, within a geometric region using the electron force field. A +compute of this style can be used by commands that compute a +temperature, e.g. thermo_modify.
The operation of this compute is exactly like that described by the compute temp/region command, where the