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remove redundant/obsolete link definitions

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This commit is contained in:
Axel Kohlmeyer
2020-01-31 14:00:53 -05:00
parent 56ff70de70
commit ce10fd01a8
691 changed files with 0 additions and 2086 deletions
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3
doc/src/Build.rst
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@ -23,6 +23,3 @@ as described on the :doc:`Install <Install>` doc page.
Build_development
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Build_basics.rst
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@ -432,6 +432,3 @@ wish to do this you will need to first build LAMMPS, then manually
copy the desired LAMMPS files to the appropriate system directories.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Build_cmake.rst
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@ -240,6 +240,3 @@ Instructions on how to install it on various platforms can be found
`on this page <https://cmake.org/install/>`_.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Build_development.rst
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@ -115,6 +115,3 @@ These reports require GCOVR to be installed. The easiest way to do this to insta
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Build_extras.rst
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@ -1416,6 +1416,3 @@ Makefile.lammps. If none of the provided files work, you will need to
edit the Makefile.lammps file. See lib/vtk/README for details.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Build_link.rst
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@ -86,6 +86,3 @@ Other examples in the COUPLE directory use coupling ideas discussed on
the :doc:`Howto couple <Howto_couple>` doc page.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Build_make.rst
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@ -89,6 +89,3 @@ settings may become outdated:
make kokkos_phi # build with the KOKKOS package for KNLs
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Build_package.rst
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@ -260,6 +260,3 @@ Type "make package-diff" to list all differences between pairs of
files in both the src dir and a package dir.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Build_settings.rst
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@ -490,6 +490,3 @@ e.g. to Python.
LMP_INC = -DLAMMPS_EXCEPTIONS
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Build_windows.rst
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@ -106,6 +106,3 @@ style build environment, but the LAMMPS code itself is not fully ported
to support Visual C++. Volunteers to take on this task are welcome.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Commands_removed.rst
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@ -62,6 +62,3 @@ combination of the commands :doc:`read_restart <read_restart>` and
convenience this conversion can also be triggered by :doc:`command line flags <Run_options>`
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Errors.rst
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@ -17,6 +17,3 @@ additional details for many of them.
Errors_warnings
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Errors_bugs.rst
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@ -27,6 +27,3 @@ causing the problem.
this page needs to have GitHub issues info added
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Errors_common.rst
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@ -123,6 +123,3 @@ setting or two (usually via an environment variable) to enable
buffering or boost the sizes of messages that can be buffered.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Errors_messages.rst
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@ -8419,6 +8419,3 @@ keyword to allow for additional bonds to be formed
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Errors_warnings.rst
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@ -800,6 +800,3 @@ This will most likely cause errors in kinetic fluctuations.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Examples.rst
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@ -232,6 +232,3 @@ page for more info on specific USER packages.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto.rst
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@ -101,6 +101,3 @@ Packages howto
Howto_spins
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_2d.rst
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@ -43,6 +43,3 @@ are for 2d models.
commands.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_barostat.rst
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@ -63,6 +63,3 @@ re-define what pressure compute is used for default thermodynamic
output.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_bash.rst
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@ -286,6 +286,3 @@ the PATH variable should be
tutorials explaining Bash and Basic Unix commands (e.g., `Linux Journey <https://linuxjourney.com>`_)
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_bioFF.rst
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@ -146,6 +146,3 @@ Spellmeyer, Fox, Caldwell, Kollman, JACS 117, 5179-5197 (1995).
(1990).
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_body.rst
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@ -514,6 +514,3 @@ Particuology, 6, 455 (2008).
Matter, 13, 1 (2011).
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_chunk.rst
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@ -214,6 +214,3 @@ on the :doc:`compute chunk/spread/atom <compute_chunk_spread_atom>`
command doc page.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_client_server.rst
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@ -159,6 +159,3 @@ the multiple executables that the mpirun command launches. In this
example the client was colored with a 0, and the server with a 1.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_coreshell.rst
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@ -266,6 +266,3 @@ The additional section in the date file would be formatted like this:
6, 393-404 (1994).
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_couple.rst
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@ -120,6 +120,3 @@ described on the :doc:`Howto client/server <Howto_client_server>` doc
page.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_diffusion.rst
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@ -27,6 +27,3 @@ and thus extract D.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_dispersion.rst
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@ -100,6 +100,3 @@ rule is fulfilled. If mixing rules do not apply, the user will have
to specify this command explicitly.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_drude.rst
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@ -67,6 +67,3 @@ too close, which can cause numerical issues.
**(Lamoureux and Roux)** G. Lamoureux, B. Roux, J. Chem. Phys 119, 3025 (2003)
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_drude2.rst
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@ -537,6 +537,3 @@ NPT ensemble using Nose-Hoover thermostat:
Let, 418, 245-249 (2006)
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_elastic.rst
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@ -44,6 +44,3 @@ converge and requires careful post-processing :ref:`(Shinoda) <Shinoda1>`
**(Shinoda)** Shinoda, Shiga, and Mikami, Phys Rev B, 69, 134103 (2004).
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_github.rst
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@ -494,6 +494,3 @@ A discussion of the LAMMPS developer GitHub workflow can be found in the file
`doc/github-development-workflow.md <https://github.com/lammps/lammps/blob/master/doc/github-development-workflow.md>`_
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_granular.rst
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@ -50,6 +50,3 @@ computations between frozen atoms by using this command:
doc page, where 2d simulations are discussed.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_kappa.rst
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@ -81,6 +81,3 @@ formalism.
(2015).
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_library.rst
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@ -247,6 +247,3 @@ assigned via the lammps\_scatter\_atoms() or lammps\_extract\_atom()
functions.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_manifold.rst
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@ -52,6 +52,3 @@ to the relevant fixes.
preprint available at `arXiv:1411.3019 <http://arxiv.org/abs/1411.3019/>`_.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_multiple.rst
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@ -98,6 +98,3 @@ partition. When one finished, that partition would then start
the 4th simulation, and so forth, until all 8 were completed.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_nemd.rst
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@ -55,6 +55,3 @@ using the :doc:`fix flow/gauss <fix_flow_gauss>` command.
Cambridge University Press, https://doi.org/10.1017/9781139017848, (2017).
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_output.rst
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@ -344,6 +344,3 @@ vector input could be a column of an array.
+--------------------------------------------------------+----------------------------------------------+-------------------------------------------+
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_polarizable.rst
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@ -73,6 +73,3 @@ relative core-Drude particle motion is thermostatted separately as
well.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_pylammps.rst
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@ -579,6 +579,3 @@ want to encourage people to write tutorial style IPython notebooks showcasing LA
and maybe their latest research results.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_replica.rst
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@ -55,6 +55,3 @@ a multi-replica simulation on more replicas than you have
physical processors.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_restart.rst
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@ -100,6 +100,3 @@ LAMMPS the current timestep. This value is stored in restart files,
but not in data files.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_spc.rst
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@ -52,6 +52,3 @@ Wikipedia also has a nice article on `water models <http://en.wikipedia.org/wiki
6269-6271 (1987).
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_spherical.rst
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@ -238,6 +238,3 @@ as rigid bodies, and their motion integrated with a command like :doc:`fix nve/b
particles are computed via a command like :doc:`pair_style body/nparticle <pair_body_nparticle>`.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_spins.rst
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@ -68,6 +68,3 @@ magnetic spin, or the magnetic force acting on this spin.
Journal of Computational Physics, 372, 406-425, (2018).
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_temperature.rst
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@ -33,6 +33,3 @@ velocity bias. This allows the translational velocity of spherical or
aspherical particles to be adjusted in prescribed ways.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_thermostat.rst
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@ -94,6 +94,3 @@ temperature compute is used for default thermodynamic output.
Cambridge University Press, https://doi.org/10.1017/9781139017848, (2017).
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_tip3p.rst
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@ -76,6 +76,3 @@ Phys, 79, 926 (1983).
**(Price)** Price and Brooks, J Chem Phys, 121, 10096 (2004).
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_tip4p.rst
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@ -111,6 +111,3 @@ Wikipedia also has a nice article on `water models <http://en.wikipedia.org/wiki
Phys, 79, 926 (1983).
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

14
doc/src/Howto_triclinic.rst
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@ -1,17 +1,3 @@
:doc:`Higher level section <Howto>` - `LAMMPS WWW Site <lws_>`_ - `LAMMPS Documentation <ld_>`_ - `LAMMPS Commands <lc_>`_
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands\_all.html
Triclinic (non-orthogonal) simulation boxes
===========================================

3
doc/src/Howto_viscosity.rst
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@ -143,6 +143,3 @@ with time at sufficiently long times.
Cambridge University Press, https://doi.org/10.1017/9781139017848, (2017).
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_viz.rst
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@ -38,6 +38,3 @@ snapshots.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Howto_walls.rst
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@ -71,6 +71,3 @@ command. At some point we plan to allow regoin surfaces to be used as
frictional walls, as well as triangulated surfaces.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Install.rst
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@ -53,6 +53,3 @@ some of them if you download executables, as explained on the pages
listed above.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Install_conda.rst
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@ -43,6 +43,3 @@ up the Conda capability.
.. _mini_conda_install: https://docs.conda.io/en/latest/miniconda.html
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Install_git.rst
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@ -123,6 +123,3 @@ gmail.com) and Richard Berger (Temple U, richard.berger at
temple.edu).
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Install_linux.rst
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@ -264,6 +264,3 @@ Note that the AUR provides build-scripts that download the source and
the build the package on your machine.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Install_mac.rst
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@ -49,6 +49,3 @@ up the Homebrew capability.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Install_patch.rst
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@ -63,6 +63,3 @@ up to date.
package-update".
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Install_svn.rst
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@ -97,6 +97,3 @@ gmail.com) and Richard Berger (Temple U, richard.berger at
temple.edu).
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Install_tarball.rst
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@ -79,6 +79,3 @@ in the new patch release. Instructions for applying a patch file are
on the :doc:`Install patch <Install_patch>` doc page.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Install_windows.rst
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@ -44,6 +44,3 @@ Thanks to Axel Kohlmeyer (Temple U, akohlmey at gmail.com) for setting
up this Windows capability.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Intro.rst
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@ -16,6 +16,3 @@ These pages provide a brief introduction to LAMMPS.
Intro_website
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Intro_authors.rst
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@ -64,6 +64,3 @@ version of LAMMPS were the following:
* Jim Belak and Roy Pollock (LLNL)
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Intro_features.rst
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@ -226,6 +226,3 @@ classical MD options:
* :doc:`two-temperature electron model <fix_ttm>`
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Intro_nonfeatures.rst
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@ -82,6 +82,3 @@ Here are suggestions on how to perform these tasks:
and is available for download from `this page <http://www.cs.sandia.gov/~sjplimp/download.html>`_.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Intro_opensource.rst
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@ -44,6 +44,3 @@ source file headers (including the copyright and GPL notices) should
remain part of the code.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Intro_overview.rst
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@ -49,6 +49,3 @@ Processors communicate and store "ghost" atom information for atoms
that border their sub-domain.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Intro_website.rst
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@ -34,6 +34,3 @@ this Intr are included in this list.
* `Funding for LAMMPS <http://lammps.sandia.gov/funding.html>`_
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Manual.rst
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@ -87,6 +87,3 @@ Indices and tables
</BODY>
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Manual_build.rst
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@ -136,6 +136,3 @@ software installed. `http://calibre-ebook.com/ <http://calibre-ebook.com/>`_
You first create the ePUB file and then convert it with 'make mobi'
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Manual_version.rst
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@ -23,6 +23,3 @@ first page of the :doc:`manual <Manual>`.
describe the version you have, which may be older.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Modify.rst
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@ -35,6 +35,3 @@ as a pull request on our `GitHub site <https://github.com/lammps/lammps>`_, afte
Modify_variable
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Modify_atom.rst
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@ -119,6 +119,3 @@ Ivector or dvector are vectors of length Nlocal = # of owned atoms,
which store the attributes of individual atoms.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Modify_body.rst
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@ -35,6 +35,3 @@ class. See body.h for details.
+----------------------+-----------------------------------------------------------+
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Modify_bond.rst
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@ -36,6 +36,3 @@ for details and specific additional methods.
+-----------------------+---------------------------------------------------------------------------+
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Modify_command.rst
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@ -20,6 +20,3 @@ Of course, the new class can define other methods and variables as
needed.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Modify_compute.rst
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@ -57,6 +57,3 @@ compute\_vector or compute\_peratom methods. The USER-TALLY package
provides *examples*\ \_compute\_tally.html for utilizing this mechanism.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Modify_contribute.rst
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@ -198,6 +198,3 @@ easier you make it for people to get started, e.g. by providing example
scripts, the more likely it is that users will try out your new feature.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Modify_dump.rst
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@ -32,6 +32,3 @@ added to the :doc:`dump custom <dump>` command. Instead they are added
to the :doc:`compute property/atom <compute_property_atom>` command.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Modify_fix.rst
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@ -153,6 +153,3 @@ enables a fix to contribute values to thermodynamic output, as printed
quantities and/or to be summed to the potential energy of the system.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Modify_kspace.rst
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@ -21,6 +21,3 @@ class. See kspace.h for details.
+---------------+----------------------------------------------+
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Modify_min.rst
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@ -19,6 +19,3 @@ class. See min.h for details.
+---------------+------------------------------------------+
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Modify_overview.rst
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@ -102,6 +102,3 @@ functionality:
**(Foo)** Foo, Morefoo, and Maxfoo, J of Classic Potentials, 75, 345 (1997).
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Modify_pair.rst
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@ -35,6 +35,3 @@ Here is a brief description of the class methods in pair.h:
The inner/middle/outer routines are optional.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Modify_region.rst
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@ -22,6 +22,3 @@ class. See region.h for details.
+-------------------+---------------------------------------------------------------------+
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Modify_thermo.rst
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@ -27,6 +27,3 @@ be simpler to compute what you wish via one of those constructs, than
by adding a new keyword to the thermo command.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Modify_variable.rst
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@ -40,6 +40,3 @@ Adding new :doc:`compute styles <compute>` (whose calculated values can
then be accessed by variables) is discussed on the :doc:`Modify compute <Modify_compute>` doc page.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Packages.rst
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@ -20,6 +20,3 @@ LAMMPS build process.
Packages_details
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Packages_details.rst
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@ -2448,6 +2448,3 @@ which discuss the `QuickFF <quickff_>`_ methodology.
* examples/USER/yaff
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Packages_standard.rst
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@ -91,6 +91,3 @@ package:
+----------------------------------+--------------------------------------+----------------------------------------------------+-----------------------------------------------------+---------+
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Packages_user.rst
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@ -115,6 +115,3 @@ package:
.. _MOFplus: https://www.mofplus.org/content/show/MOF-FF
.. _PLUMED: http://www.plumed.org
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Python_call.rst
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@ -79,6 +79,3 @@ library and insure that Python can find the python/lammps.py file and
the shared library.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Python_examples.rst
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@ -111,6 +111,3 @@ different visualization package options. Click to see larger images:
:target: JPG/screenshot_vmd.jpg
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Python_head.rst
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@ -44,6 +44,3 @@ a pull request to our `GitHub site <https://github.com/lammps/lammps>`_,
and they can be added to the LAMMPS distribution or webpage.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Python_install.rst
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@ -70,6 +70,3 @@ system directory. This is not needed if you set the LD\_LIBRARY\_PATH
environment variable as described above.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Python_library.rst
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@ -275,6 +275,3 @@ following steps:
:members:
:no-undoc-members:
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

3
doc/src/Python_mpi.rst
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@ -76,6 +76,3 @@ and see one line of output for each processor you run on.
the right one.
.. _lws: http://lammps.sandia.gov
.. _ld: Manual.html
.. _lc: Commands_all.html

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