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<meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>12. Errors &mdash; LAMMPS 15 May 2015 version documentation</title>
<title>Errors &mdash; LAMMPS 15 May 2015 version documentation</title>
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<link rel="top" title="LAMMPS 15 May 2015 version documentation" href="index.html"/>
<link rel="next" title="13. Future and history" href="Section_history.html"/>
<link rel="prev" title="11. Python interface to LAMMPS" href="Section_python.html"/>
<link rel="top" title="LAMMPS 15 May 2015 version documentation" href="index.html"/>
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<ul class="current">
<li class="toctree-l1"><a class="reference internal" href="Section_intro.html">1. Introduction</a></li>
<li class="toctree-l1"><a class="reference internal" href="Section_start.html">2. Getting Started</a></li>
<li class="toctree-l1"><a class="reference internal" href="Section_commands.html">3. Commands</a></li>
<li class="toctree-l1"><a class="reference internal" href="Section_packages.html">4. Packages</a></li>
<li class="toctree-l1"><a class="reference internal" href="Section_accelerate.html">5. Accelerating LAMMPS performance</a></li>
<li class="toctree-l1"><a class="reference internal" href="Section_howto.html">6. How-to discussions</a></li>
<li class="toctree-l1"><a class="reference internal" href="Section_example.html">7. Example problems</a></li>
<li class="toctree-l1"><a class="reference internal" href="Section_perf.html">8. Performance &amp; scalability</a></li>
<li class="toctree-l1"><a class="reference internal" href="Section_tools.html">9. Additional tools</a></li>
<li class="toctree-l1"><a class="reference internal" href="Section_modify.html">10. Modifying &amp; extending LAMMPS</a></li>
<li class="toctree-l1"><a class="reference internal" href="Section_python.html">11. Python interface to LAMMPS</a></li>
<li class="toctree-l1 current"><a class="current reference internal" href="">12. Errors</a><ul>
<li class="toctree-l2"><a class="reference internal" href="#common-problems">12.1. Common problems</a></li>
<li class="toctree-l2"><a class="reference internal" href="#reporting-bugs">12.2. Reporting bugs</a></li>
<li class="toctree-l2"><a class="reference internal" href="#error-warning-messages">12.3. Error &amp; warning messages</a></li>
<li class="toctree-l2"><a class="reference internal" href="#error">12.4. Errors:</a></li>
<li class="toctree-l2"><a class="reference internal" href="#warnings">12.5. Warnings:</a></li>
<!-- Local TOC -->
<div class="local-toc"><ul>
<li><a class="reference internal" href="#">Errors</a><ul>
<li><a class="reference internal" href="#common-problems">Common problems</a></li>
<li><a class="reference internal" href="#reporting-bugs">Reporting bugs</a></li>
<li><a class="reference internal" href="#error-warning-messages">Error &amp; warning messages</a></li>
<li><a class="reference internal" href="#error">Errors:</a></li>
<li><a class="reference internal" href="#warnings">Warnings:</a></li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="Section_history.html">13. Future and history</a></li>
</ul>
</div>
</div>
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<ul class="wy-breadcrumbs">
<li><a href="Manual.html">Docs</a> &raquo;</li>
<li>12. Errors</li>
<li>Errors</li>
<li class="wy-breadcrumbs-aside">
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<div itemprop="articleBody">
<div class="section" id="errors">
<h1>12. Errors<a class="headerlink" href="#errors" title="Permalink to this headline"></a></h1>
<h1>Errors<a class="headerlink" href="#errors" title="Permalink to this headline"></a></h1>
<p>This section describes the errors you can encounter when using LAMMPS,
either conceptually, or as printed out by the program.</p>
<div class="line-block">
@ -143,7 +130,7 @@ either conceptually, or as printed out by the program.</p>
<div class="line"><br /></div>
</div>
<div class="section" id="common-problems">
<span id="err-1"></span><h2>12.1. Common problems<a class="headerlink" href="#common-problems" title="Permalink to this headline"></a></h2>
<span id="err-1"></span><h2>Common problems<a class="headerlink" href="#common-problems" title="Permalink to this headline"></a></h2>
<p>If two LAMMPS runs do not produce the same answer on different
machines or different numbers of processors, this is typically not a
bug. In theory you should get identical answers on any number of
@ -232,7 +219,7 @@ buffering or boost the sizes of messages that can be buffered.</p>
<hr class="docutils" />
</div>
<div class="section" id="reporting-bugs">
<span id="err-2"></span><h2>12.2. Reporting bugs<a class="headerlink" href="#reporting-bugs" title="Permalink to this headline"></a></h2>
<span id="err-2"></span><h2>Reporting bugs<a class="headerlink" href="#reporting-bugs" title="Permalink to this headline"></a></h2>
<p>If you are confident that you have found a bug in LAMMPS, follow these
steps.</p>
<p>Check the <a class="reference external" href="http://lammps.sandia.gov/bug.html">New features and bug fixes</a> section of the <a class="reference external" href="http://lammps.sandia.gov">LAMMPS WWW site</a> to see if the bug has already been reported or fixed or the
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<hr class="docutils" />
</div>
<div class="section" id="error-warning-messages">
<span id="err-3"></span><h2>12.3. Error &amp; warning messages<a class="headerlink" href="#error-warning-messages" title="Permalink to this headline"></a></h2>
<span id="err-3"></span><h2>Error &amp; warning messages<a class="headerlink" href="#error-warning-messages" title="Permalink to this headline"></a></h2>
<p>These are two alphabetic lists of the <a class="reference internal" href="#error"><span>ERROR</span></a> and
<a class="reference internal" href="#warn"><span>WARNING</span></a> messages LAMMPS prints out and the reason why. If the
explanation here is not sufficient, the documentation for the
@ -269,7 +256,7 @@ error occurs and is not self-explanatory, you&#8217;ll need to look in the
source code or contact the author of the package.</p>
</div>
<div class="section" id="error">
<span id="id2"></span><h2>12.4. Errors:<a class="headerlink" href="#error" title="Permalink to this headline"></a></h2>
<span id="id2"></span><h2>Errors:<a class="headerlink" href="#error" title="Permalink to this headline"></a></h2>
<dl class="docutils">
<dt><em>1-3 bond count is inconsistent</em></dt>
<dd>An inconsistency was detected when computing the number of 1-3
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</dl>
</div>
<div class="section" id="warnings">
<span id="warn"></span><h2>12.5. Warnings:<a class="headerlink" href="#warnings" title="Permalink to this headline"></a></h2>
<span id="warn"></span><h2>Warnings:<a class="headerlink" href="#warnings" title="Permalink to this headline"></a></h2>
<dl class="docutils">
<dt><em>Adjusting Coulombic cutoff for MSM, new cutoff = %g</em></dt>
<dd>The adjust/cutoff command is turned on and the Coulombic cutoff has been
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</div>
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