update LAMMPS class diagram
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@ -10,14 +10,10 @@ digraph lammps {
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Fo [shape=box label="Force" color=blue]
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Gr [shape=box label="Group" color=blue]
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In [shape=box label="Input" color=blue]
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Ko [shape=box label="KokkosLMP"]
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Ak [shape=box label="AtomKK" color=blue]
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Mk [shape=box label="MemoryKK" color=blue]
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Me [shape=box label="Memory" color=blue]
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Mo [shape=box label="Modify" color=blue]
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Ne [shape=box label="Neighbor" color=blue]
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Ou [shape=box label="Output" color=blue]
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Py [shape=box label="Python" color=blue]
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Up [shape=box label="Update" color=blue]
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Un [shape=box label="Universe" color=blue]
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Ti [shape=box label="Timer" color=blue]
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@ -43,15 +39,20 @@ digraph lammps {
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Ff [label="FFT3d"]
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Re [label="Remap"]
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Gc [label="GridComm"]
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Bn [label="Bonus"]
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Cb [shape=box label="CommBrick"]
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Ct [shape=box label="CommTiled"]
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Aa [shape=box label="AtomVecAtomic"]
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Am [shape=box label="AtomVecMolecular"]
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Ae [shape=box label="AtomVecEllipsoid"]
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Lj [shape=box label="PairLJCut"]
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Lo [shape=box label="PairLJCutOMP"]
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Lg [shape=box label="PairLJCutGPU"]
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Li [shape=box label="PairLJCutIntel"]
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Lk [shape=box label="PairLJCutKokkos"]
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Te [shape=box label="PairTersoff"]
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Bh [shape=box label="BondHarmonic"]
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Bp [shape=box label="BondHarmonicOMP"]
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Bf [shape=box label="BondFENE"]
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Fa [shape=box label="FixAveTime"]
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Fn [shape=box label="FixNVE"]
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@ -63,8 +64,10 @@ digraph lammps {
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Dg [shape=box label="DumpCFG"]
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Ve [shape=box label="Verlet"]
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Rr [shape=box label="Respa"]
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Po [shape=box label="PPPMOmp"]
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La -> {At Ci Co Do Er Fo Gr In Ko Ak Mk Me Mo Ne Ou Py Ti Up Un} [penwidth=2]
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Pt [shape=box label="PPPMTIP4P"]
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Vs [shape=box label="VerletSplit"]
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Ro [shape=box label="RespaOMP"]
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La -> {At Ci Co Do Er Fo Gr In Me Mo Ne Ou Ti Up Un} [penwidth=2]
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Do -> {Rg} [penwidth=2]
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Co -> {Cb Ct} [style=dashed penwidth=2]
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Rg -> {Rb Rs} [style=dashed penwidth=2]
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@ -73,18 +76,22 @@ digraph lammps {
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Fo -> {Pa Bo An Di Im Ks} [penwidth=2]
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Ks -> {Ew Pp} [style=dashed penwidth=2]
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Pp -> {Ff Re Gc} [penwidth=2]
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Pp -> {Po} [style=dashed penwidth=2]
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Pp -> {Pt} [style=dashed penwidth=2]
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Up -> {It Mi} [penwidth=2]
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It -> {Ve Rr} [style=dashed penwidth=2]
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Ou -> {Du Th} [penwidth=2]
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Du -> {Da Dc} [style=dashed penwidth=2]
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Dc -> {Dg} [style=dashed penwidth=2]
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At -> Av [penwidth=2]
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Av -> {Aa Am} [style=dashed penwidth=2]
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Av -> {Aa Am Ae} [style=dashed penwidth=2]
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Ae -> Bn [penwidth=2]
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Pa -> {Lj Te} [style=dashed penwidth=2]
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Lj -> {Lo Lg} [style=dashed penwidth=2]
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Lj -> {Lo Lg Li Lk} [style=dashed penwidth=2]
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Bo -> {Bh Bf} [style=dashed penwidth=2]
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Bh -> Bp [style=dashed penwidth=2]
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Fi -> {Fa Fn Fh} [style=dashed penwidth=2]
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Fh -> {Fp Ft} [style=dashed penwidth=2]
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Ve -> Vs [style=dashed penwidth=2]
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Rr -> Ro [style=dashed penwidth=2]
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}
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