Fix more typos in examples

examples/USER/atc/README

@@ -65,7 +65,7 @@ elastic:
     in.bar1d_ghost_flux - Quasi-1D elastic wave propagation with coupling using boundary stresses from ghost atoms
     in.bar1d_thermo_elastic - Quasi-1D finite temperature elastic wave propagation
     in.cnt_electrostatic - Mechanical response of CNT with fixed charge density in an electric field
-    in.cnt_electrostatic2 - Mechanical reponse of CNT with self-consistent charge density and electric field
+    in.cnt_electrostatic2 - Mechanical response of CNT with self-consistent charge density and electric field
     in.cnt_fixed_charge - Mechancial response of CNT with fixed atomic charges in an electric field
     in.eam_energy - Quasi-static/quasi-1D coupling and transfer extraction of energy density for EAM gold
     in.electron_density - Mechanical response of differnt CNT models with a self-consistent electron density and electric field
@@ -146,7 +146,7 @@ elastic:
     in.bar1d_ghost_flux - Quasi-1D elastic wave propagation with coupling using boundary stresses from ghost atoms
     in.bar1d_thermo_elastic - Quasi-1D finite temperature elastic wave propagation
     in.cnt_electrostatic - Mechanical response of CNT with fixed charge density in an electric field
-    in.cnt_electrostatic2 - Mechanical reponse of CNT with self-consistent charge density and electric field
+    in.cnt_electrostatic2 - Mechanical response of CNT with self-consistent charge density and electric field
     in.cnt_fixed_charge - Mechancial response of CNT with fixed atomic charges in an electric field
     in.eam_energy - Quasi-static/quasi-1D coupling and transfer extraction of energy density for EAM gold
     in.electron_density - Mechanical response of differnt CNT models with a self-consistent electron density and electric field

examples/USER/atc/fluids/in.bar1d_fluids

@@ -1,6 +1,6 @@
 #AtC Thermal Coupling
 # This benchmark tests heat conducting into and out of the MD region.  The
-# temperature is intially 20 everywhere and the left boundary BC is fixed at
+# temperature is initially 20 everywhere and the left boundary BC is fixed at
 # 40.# The result should show heat diffusing through the FEM to the MD and back
 # out # to the FEM on the right.  Insufficient time is captured to reach the
 # linear # steady state, but heat crossing both boundaries should be observed.

examples/USER/atc/thermal/in.bar1d

@@ -1,6 +1,6 @@
 #AtC Thermal Coupling
 # This benchmark tests heat conducting into and out of the MD region.  The
-# temperature is intially 20 everywhere and the left boundary BC is fixed at 40.
+# temperature is initially 20 everywhere and the left boundary BC is fixed at 40.
 # The result should show heat diffusing through the FEM to the MD and back out 
 # to the FEM on the right.  Insufficient time is captured to reach the linear 
 # steady state, but heat crossing both boundaries should be observed.

examples/USER/atc/thermal/in.bar1d_all_atoms

@@ -1,6 +1,6 @@
 #AtC Thermal Coupling
 # This benchmark tests thermostats applied in all atom simulations.  The
-# temperature is intially 20 everywhere and the left boundary BC is fixed at
+# temperature is initially 20 everywhere and the left boundary BC is fixed at
 # 40.# The result should show heat diffusing through the FEM to the MD and back
 # out # to the FEM on the right.  Insufficient time is captured to reach the
 # linear # steady state, but heat crossing both boundaries should be observed.

examples/USER/atc/thermal/in.bar1d_combined

@@ -1,6 +1,6 @@
 #AtC Thermal Coupling
 # This benchmark tests heat conducting into an MD region at a fixed temperature at one end.  The
-# temperature is intially 20 everywhere and the left boundary BC is fixed at
+# temperature is initially 20 everywhere and the left boundary BC is fixed at
 # 40.# The result should show heat diffusing through the FEM to the MD and back
 # out # to the FEM on the right.  Insufficient time is captured to reach the
 # linear # steady state, but heat crossing the boundaries should be observed,

examples/USER/atc/thermal/in.bar1d_flux

@@ -1,6 +1,6 @@
 #AtC Thermal Coupling
 # This benchmark tests heat conducting into and out of the MD region.  The
-# temperature is intially 20 everywhere and the left boundary BC is fixed at
+# temperature is initially 20 everywhere and the left boundary BC is fixed at
 # 40.# The result should show heat diffusing through the FEM to the MD and back
 # out # to the FEM on the right.  Insufficient time is captured to reach the
 # linear # steady state, but heat crossing both boundaries should be observed.

examples/USER/atc/thermal/in.bar1d_frac_step

@@ -1,6 +1,6 @@
 #AtC Thermal Coupling
 # This benchmark tests heat conducting into and out of the MD region.  The
-# temperature is intially 20 everywhere and the left boundary BC is fixed at
+# temperature is initially 20 everywhere and the left boundary BC is fixed at
 # 40.# The result should show heat diffusing through the FEM to the MD and back
 # out # to the FEM on the right.  Insufficient time is captured to reach the
 # linear # steady state, but heat crossing both boundaries should be observed.

examples/USER/atc/thermal/in.bar1d_hoover

@@ -1,6 +1,6 @@
 # AtC Thermal Coupling
 # This benchmark tests thermostats applied in all atom simulations.  The
-# temperature is intially 20 everywhere and the left boundary BC is fixed at
+# temperature is initially 20 everywhere and the left boundary BC is fixed at
 # 40.# The result should show heat diffusing through the FEM to the MD and back
 # out # to the FEM on the right.  Insufficient time is captured to reach the
 # linear # steady state, but heat crossing both boundaries should be observed.

examples/USER/atc/thermal/in.bar1d_interpolate

@@ -1,6 +1,6 @@
 #AtC Thermal Coupling
 # This benchmark tests heat conducting into and out of the MD region.  The
-# temperature is intially 20 everywhere and the left boundary BC is fixed at
+# temperature is initially 20 everywhere and the left boundary BC is fixed at
 # 40.# The result should show heat diffusing through the FEM to the MD and back
 # out # to the FEM on the right.  Insufficient time is captured to reach the
 # linear # steady state, but heat crossing both boundaries should be observed.

examples/USER/atc/thermal/in.bar1d_lumped

@@ -1,6 +1,6 @@
 #AtC Thermal Coupling
 # This benchmark tests heat conducting into and out of the MD region.  The
-# temperature is intially 20 everywhere and the left boundary BC is fixed at
+# temperature is initially 20 everywhere and the left boundary BC is fixed at
 # 40.# The result should show heat diffusing through the FEM to the MD and back
 # out # to the FEM on the right.  Insufficient time is captured to reach the
 # linear # steady state, but heat crossing both boundaries should be observed.

examples/USER/misc/srp/in.srp

@@ -24,7 +24,7 @@ pair_coeff      1 1 dpd 60.0 4.5 1.0
 pair_coeff      1 2 none
 pair_coeff      2 2 srp 100.0 
 
-# auto normalization of thermo quantites is turned off by pair srp
+# auto normalization of thermo quantities is turned off by pair srp
 # just divide by natoms 
 variable        natoms equal count(all)
 variable        nPotEng equal c_thermo_pe/v_natoms 

examples/USER/phonon/3-3D-FCC-Cu-EAM/README

@@ -1,5 +1,5 @@
 This directory illustrates the usage of fix-phonon to calculate the dynamical
-matrix as well as phonon dispersion curve for FCC Cu based on EAM potentail.
+matrix as well as phonon dispersion curve for FCC Cu based on EAM potential.
 
 The files under this directory:
 

examples/USER/phonon/4-Graphene/README

@@ -1,5 +1,5 @@
 This directory illustrates the usage of fix-phonon to calculate the dynamical
-matrix as well as phonon dispersion curve for Graphene based on a Tersoff potentail.
+matrix as well as phonon dispersion curve for Graphene based on a Tersoff potential.
 
 The files under this directory:
 

examples/USER/tally/README

@@ -3,4 +3,4 @@ Examples and tests for USER-TALLY compute styles.
 The examples in this directory show where and how compute tally styles
 are equivalent to other facilities in LAMMPS and thus they can also be
 used to validate their correct function. Various columns should have 
-equivalent or idential output as indicated in the input.
+equivalent or identical output as indicated in the input.