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ATC version 2.0, date: Aug21

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git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@10638 f3b2605a-c512-4ea7-a41b-209d697bcdaa
This commit is contained in:
rjones
2013-08-21 23:06:07 +00:00
parent 0f69054d68
commit d77ab2f96a
161 changed files with 3811 additions and 2548 deletions
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20
lib/atc/DependencyManager.h
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@ -8,8 +8,6 @@
#include "ATC_Error.h"
#include "MPI_Wrappers.h"
using namespace MPI_Wrappers;
namespace ATC {
class InterscaleManager;
@ -54,7 +52,7 @@ namespace ATC {
void propagate_reset()
{
if (!isFixed_) {
set<DependencyManager *>::iterator it;
std::set<DependencyManager *>::iterator it;
for (it = dependentQuantities_.begin(); it != dependentQuantities_.end(); it++)
(*it)->force_reset();
}
@ -95,7 +93,7 @@ namespace ATC {
protected:
/** list of dependent atomic quantities */
set<DependencyManager * > dependentQuantities_;
std::set<DependencyManager * > dependentQuantities_;
/** flag for needing a recent */
// mutable is applied because there can be internal updates because we update when needed rather than when pushed
@ -187,7 +185,7 @@ namespace ATC {
virtual void operator/=(const MatrixDependencyManager<T,U> & divisor) {get_quantity()/=divisor.quantity(); propagate_reset();};
/** execute the matrix print command */
virtual void const print(const string &name) {get_quantity().print(name);};
virtual void const print(const std::string &name) {get_quantity().print(name);};
protected:
@ -274,10 +272,10 @@ namespace ATC {
virtual ~SetDependencyManager() {};
/** returns a non-const version for manipulations and changes, resets dependent quantities */
virtual set<T> & set_quantity() {propagate_reset(); return quantity_;};
virtual std::set<T> & set_quantity() {propagate_reset(); return quantity_;};
/** access to a constant dense matrix of the quantity, indexed by AtC atom counts */
virtual const set<T> & quantity() const {return quantity_;};
virtual const std::set<T> & quantity() const {return quantity_;};
/** size of the set */
virtual int size() const {return (this->quantity()).size();};
@ -286,7 +284,7 @@ namespace ATC {
/** underlying set */
// mutable is applied because there can be internal updates because we update when needed rather than when pushed
mutable set<T> quantity_;
mutable std::set<T> quantity_;
};
@ -307,10 +305,10 @@ namespace ATC {
virtual ~VectorDependencyManager() {};
/** returns a non-const version for manipulations and changes, resets dependent quantities */
virtual vector<T> & set_quantity() {propagate_reset(); return quantity_;};
virtual std::vector<T> & set_quantity() {propagate_reset(); return quantity_;};
/** access to a constant dense matrix of the quantity, indexed by AtC atom counts */
virtual const vector<T> & quantity() const {return quantity_;};
virtual const std::vector<T> & quantity() const {return quantity_;};
/** size of the set */
virtual int size() const {return (this->quantity()).size();};
@ -319,7 +317,7 @@ namespace ATC {
/** underlying set */
// mutable is applied because there can be internal updates because we update when needed rather than when pushed
mutable vector<T> quantity_;
mutable std::vector<T> quantity_;
};