From d82f4c3460987b80d92dcfc4e40b20fcc9fbd615 Mon Sep 17 00:00:00 2001 From: sjplimp Date: Mon, 3 Jan 2011 23:05:56 +0000 Subject: [PATCH] git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5452 f3b2605a-c512-4ea7-a41b-209d697bcdaa --- doc/minimize.html | 11 ++++------- doc/minimize.txt | 11 ++++------- 2 files changed, 8 insertions(+), 14 deletions(-) diff --git a/doc/minimize.html b/doc/minimize.html index 0921d1bf86..1587e70dd5 100644 --- a/doc/minimize.html +++ b/doc/minimize.html @@ -66,12 +66,6 @@ damped dynamics using an Euler integration step. Thus they require a timestep be defined, typically the same value used for running dynamics with the system.

-

IMPORTANT NOTE: Etol should be set to 0.0 when using the quickmin -or fire minimization styles. This is because they -periodically reset velocities to 0.0 and take a zero-length step which -will appear as a 0.0 energy change, stopping the minimizer if etol -is finite. -

The objective function being minimized is the total potential energy of the system as a function of the N atom coordinates:

@@ -104,7 +98,10 @@ of the atoms. unitless; it is met when the energy change between successive iterations divided by the energy magnitude is less than or equal to the tolerance. For example, a setting of 1.0e-4 for etol means an -energy tolerance of one part in 10^4. +energy tolerance of one part in 10^4. For the damped dynamics +minimizers this check is not performed for a few steps after +velocities are reset to 0, otherwise the minimizer would prematurely +converge.

For the second criterion, the specified force tolerance ftol is in force units, since it is the length of the global force vector for all diff --git a/doc/minimize.txt b/doc/minimize.txt index 9b203f1820..7524377290 100644 --- a/doc/minimize.txt +++ b/doc/minimize.txt @@ -63,12 +63,6 @@ damped dynamics using an Euler integration step. Thus they require a "timestep"_timestep.html be defined, typically the same value used for "running dynamics"_run.html with the system. -IMPORTANT NOTE: {Etol} should be set to 0.0 when using the {quickmin} -or {fire} "minimization styles"_min_style.html. This is because they -periodically reset velocities to 0.0 and take a zero-length step which -will appear as a 0.0 energy change, stopping the minimizer if {etol} -is finite. - The objective function being minimized is the total potential energy of the system as a function of the N atom coordinates: @@ -101,7 +95,10 @@ For the first criterion, the specified energy tolerance {etol} is unitless; it is met when the energy change between successive iterations divided by the energy magnitude is less than or equal to the tolerance. For example, a setting of 1.0e-4 for {etol} means an -energy tolerance of one part in 10^4. +energy tolerance of one part in 10^4. For the damped dynamics +minimizers this check is not performed for a few steps after +velocities are reset to 0, otherwise the minimizer would prematurely +converge. For the second criterion, the specified force tolerance {ftol} is in force units, since it is the length of the global force vector for all