From e58aeebcce3e15fc315c34354ddb4eae5f6dc5cf Mon Sep 17 00:00:00 2001 From: Axel Kohlmeyer Date: Thu, 12 Mar 2020 00:13:58 -0400 Subject: [PATCH] update URLs for pizza.py homepage --- doc/src/Howto_viz.rst | 2 +- doc/src/Intro_features.rst | 2 +- doc/src/Intro_nonfeatures.rst | 2 +- doc/src/Python_examples.rst | 2 +- doc/src/Tools.rst | 2 +- doc/src/balance.rst | 2 +- doc/src/dump.rst | 2 +- doc/src/dump_image.rst | 4 ++-- doc/src/fix_balance.rst | 2 +- 9 files changed, 10 insertions(+), 10 deletions(-) diff --git a/doc/src/Howto_viz.rst b/doc/src/Howto_viz.rst index 3848811b13..0d7901d7eb 100644 --- a/doc/src/Howto_viz.rst +++ b/doc/src/Howto_viz.rst @@ -25,7 +25,7 @@ RasMol visualization programs. Pizza.py has tools that do interactive 3d OpenGL visualization and one that creates SVG images of dump file snapshots. -.. _pizza: http://www.sandia.gov/~sjplimp/pizza.html +.. _pizza: https://pizza.sandia.gov .. _ensight: http://www.ensight.com diff --git a/doc/src/Intro_features.rst b/doc/src/Intro_features.rst index 3ea1c88885..cff198da70 100644 --- a/doc/src/Intro_features.rst +++ b/doc/src/Intro_features.rst @@ -187,7 +187,7 @@ Pre- and post-processing plotting, and visualization for LAMMPS simulations. Pizza.py is written in `Python `_ and is available for download from `the Pizza.py WWW site `_. -.. _pizza: http://www.sandia.gov/~sjplimp/pizza.html +.. _pizza: https://pizza.sandia.gov .. _python: http://www.python.org diff --git a/doc/src/Intro_nonfeatures.rst b/doc/src/Intro_nonfeatures.rst index 6e0c85a6be..daf23eaea9 100644 --- a/doc/src/Intro_nonfeatures.rst +++ b/doc/src/Intro_nonfeatures.rst @@ -75,7 +75,7 @@ Here are suggestions on how to perform these tasks: it easier to analyze and plot. See the :doc:`Tools ` doc page for more discussion of the various tools. * **Pizza.py:** Our group has also written a separate toolkit called - `Pizza.py `_ which can do certain kinds of + `Pizza.py `_ which can do certain kinds of setup, analysis, plotting, and visualization (via OpenGL) for LAMMPS simulations. It thus provides some functionality for several of the above bullets. Pizza.py is written in `Python `_ diff --git a/doc/src/Python_examples.rst b/doc/src/Python_examples.rst index 9a920eec13..d4a7fd9665 100644 --- a/doc/src/Python_examples.rst +++ b/doc/src/Python_examples.rst @@ -36,7 +36,7 @@ visualization package you have installed. Note that for GL, you need to be able to run the Pizza.py GL tool, which is included in the pizza sub-directory. See the `Pizza.py doc pages `_ for more info: -.. _pizza: http://www.sandia.gov/~sjplimp/pizza.html +.. _pizza: https://pizza.sandia.gov Note that for AtomEye, you need version 3, and there is a line in the scripts that specifies the path and name of the executable. See the diff --git a/doc/src/Tools.rst b/doc/src/Tools.rst index e03f874182..1865df25c9 100644 --- a/doc/src/Tools.rst +++ b/doc/src/Tools.rst @@ -15,7 +15,7 @@ Sandia which provides tools for doing setup, analysis, plotting, and visualization for LAMMPS simulations. .. _lws: http://lammps.sandia.gov -.. _pizza: http://pizza.sandia.gov +.. _pizza: https://pizza.sandia.gov .. _python: http://www.python.org Additional tools included in the LAMMPS distribution are described on diff --git a/doc/src/balance.rst b/doc/src/balance.rst index f43fdd6bc8..2c4c60f7b0 100644 --- a/doc/src/balance.rst +++ b/doc/src/balance.rst @@ -542,6 +542,6 @@ Related commands :doc:`group `, :doc:`processors `, :doc:`fix balance `, :doc:`comm_style ` -.. _pizza: http://pizza.sandia.gov +.. _pizza: https://pizza.sandia.gov **Default:** none diff --git a/doc/src/dump.rst b/doc/src/dump.rst index 99def93c7f..3d243f71a4 100644 --- a/doc/src/dump.rst +++ b/doc/src/dump.rst @@ -221,7 +221,7 @@ individual values and the file itself. The *atom*\ , *local*\ , and *custom* styles create files in a simple text format that is self-explanatory when viewing a dump file. Some of the LAMMPS post-processing tools described on the :doc:`Tools ` doc -page, including `Pizza.py `_, +page, including `Pizza.py `_, work with this format, as does the :doc:`rerun ` command. For post-processing purposes the *atom*\ , *local*\ , and *custom* text diff --git a/doc/src/dump_image.rst b/doc/src/dump_image.rst index b5d19fd6d7..d4efc983eb 100644 --- a/doc/src/dump_image.rst +++ b/doc/src/dump_image.rst @@ -601,8 +601,8 @@ Play the movie: % mplayer foo.mpg % ffplay bar.avi -* c) Use the `Pizza.py `_ - `animate tool `_, +* c) Use the `Pizza.py `_ + `animate tool `_, which works directly on a series of image files. .. code-block:: python diff --git a/doc/src/fix_balance.rst b/doc/src/fix_balance.rst index 471e170592..052abb2a76 100644 --- a/doc/src/fix_balance.rst +++ b/doc/src/fix_balance.rst @@ -403,6 +403,6 @@ Related commands :doc:`group `, :doc:`processors `, :doc:`balance `, :doc:`comm_style ` -.. _pizza: http://pizza.sandia.gov +.. _pizza: https://pizza.sandia.gov **Default:** none