Merge branch 'master' into relres-update

doc/utils/sphinx-config/LAMMPSLexer.py

@@ -8,8 +8,8 @@ LAMMPS_COMMANDS = ("angle_coeff", "angle_style", "atom_modify", "atom_style",
 "delete_bonds", "dielectric", "dihedral_coeff", "dihedral_style", "dimension",
 "displace_atoms", "dump_modify", "dynamical_matrix", "echo",
 "fix_modify", "group2ndx", "hyper", "if", "improper_coeff",
-"improper_style", "include", "info", "jump", "kim_init", "kim_interactions",
-"kim_param", "kim_query", "kspace_modify", "kspace_style", "label", "lattice",
+"improper_style", "include", "info", "jump", "kim",
+"kspace_modify", "kspace_style", "label", "lattice",
 "log", "mass", "message", "minimize", "min_modify", "min_style", "molecule",
 "ndx2group", "neb", "neb/spin", "neighbor", "neigh_modify", "newton", "next",
 "package", "pair_coeff", "pair_modify", "pair_style", "pair_write",

doc/utils/sphinx-config/false_positives.txt

@@ -509,6 +509,7 @@ cpp
 cpu
 createatoms
 createAtoms
+CreateIDs
 crespi
 Crespi
 Critchley
@@ -598,6 +599,7 @@ Dcut
 de
 dE
 De
+deallocated
 decorrelation
 debye
 Debye
@@ -788,6 +790,7 @@ ees
 eFF
 efield
 effm
+eflag
 eflux
 eg
 Eggebrecht
@@ -2296,6 +2299,7 @@ omegaz
 Omelyan
 omp
 OMP
+oneAPI
 onelevel
 oneway
 onn
@@ -2365,6 +2369,7 @@ parmin
 Parrinello
 Partay
 Particuology
+Pascuet
 pastewka
 Pastewka
 pathangle
@@ -2480,6 +2485,9 @@ Poresag
 pos
 Poschel
 posix
+postfix
+postfixed
+postfixes
 Postma
 Potapkin
 potin
@@ -2524,6 +2532,7 @@ ptm
 PTM
 ptol
 ptr
+PTX
 pu
 purdue
 Purohit
@@ -2536,6 +2545,8 @@ Px
 pxx
 Pxx
 Pxy
+pxy
+pxz
 py
 Py
 pydir
@@ -2547,10 +2558,13 @@ pymol
 pypar
 pythonic
 pytorch
+pyy
 Pyy
+pyz
 pz
 Pz
 Pzz
+pzz
 qbmsst
 qcore
 qdist
@@ -2682,6 +2696,7 @@ rfile
 rg
 Rg
 Rhaphson
+Rhe
 rheological
 rheology
 rhodo
@@ -3338,6 +3353,7 @@ verlet
 Verlet
 versa
 ves
+vflag
 vhi
 vibrational
 Vij