Merge pull request #2474 from GenieTim/master
Fix typos in documentation
This commit is contained in:
@ -119,7 +119,6 @@ Doc page with :doc:`ERROR messages <Errors_messages>`
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:doc:`pair style zero <pair_zero>` with a suitable cutoff or use :doc:`comm_modify cutoff <comm_modify>`.
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*Communication cutoff is shorter than a bond length based estimate. This may lead to errors.*
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Since LAMMPS stores topology data with individual atoms, all atoms
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comprising a bond, angle, dihedral or improper must be present on any
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sub-domain that "owns" the atom with the information, either as a
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@ -72,7 +72,7 @@ explained in more detail here: `feature branch workflow <https://www.atlassian.c
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**Feature branches**
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First of all, create a clone of your version on github on your local
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First of all, create a clone of your version on GitHub on your local
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machine via HTTPS:
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.. code-block:: bash
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@ -155,7 +155,7 @@ useful message that explains the change.
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.. code-block:: bash
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$ git commit -m 'Finally updated the github tutorial'
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$ git commit -m 'Finally updated the GitHub tutorial'
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After the commit, the changes can be pushed to the same branch on GitHub:
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@ -67,5 +67,5 @@ rotate.
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The only frictional idealized walls currently in LAMMPS are flat or
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curved surfaces specified by the :doc:`fix wall/gran <fix_wall_gran>`
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command. At some point we plan to allow regoin surfaces to be used as
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command. At some point we plan to allow region surfaces to be used as
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frictional walls, as well as triangulated surfaces.
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@ -14,7 +14,7 @@ Syntax
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* AtC fixID = ID of :doc:`fix atc <fix_atc>` instance
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* *output* or *output index* = name of the AtC sub-command
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* filename_prefix = prefix for data files (for *output*)
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* frequency = frequency of output in time-steps (for *output*)
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* frequency = frequency of output in timesteps (for *output*)
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* optional keywords for *output*:
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- text = creates text output of index, step and nodal variable values for unique nodes
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@ -56,7 +56,7 @@ is slightly modified only for the computation of long-range forces. A
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good cluster decomposition constitutes in building clusters which
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contain the fastest covalent bonds inside clusters.
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If the clusters are chosen suitably, the :doc:`run_style respa <run_style>` is stable for outer time-steps of at least 8fs.
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If the clusters are chosen suitably, the :doc:`run_style respa <run_style>` is stable for outer timesteps of at least 8fs.
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----------
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@ -90,10 +90,10 @@ accepted, *h* is increased by a proportional amount, and the next ODE step is be
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Otherwise, *h* is shrunk and the ODE step is repeated.
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Run-time diagnostics are available for the rkf45 ODE solver. The frequency
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(in time-steps) that diagnostics are reported is controlled by the last (optional)
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(in timesteps) that diagnostics are reported is controlled by the last (optional)
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12th argument. A negative frequency means that diagnostics are reported once at the
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end of each run. A positive value N means that the diagnostics are reported once
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per N time-steps.
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per N timesteps.
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The diagnostics report the average # of integrator steps and RHS function evaluations
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and run-time per ODE as well as the average/RMS/min/max per process. If the
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