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Update Kokkos library in LAMMPS to v3.3.0

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This commit is contained in:
Stan Gerald Moore
2020-12-22 08:52:37 -07:00
parent b36363e0fb
commit eea14c55a9
927 changed files with 18603 additions and 46876 deletions
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11
lib/kokkos/example/tutorial/02_simple_reduce/Makefile
View File

@ -23,15 +23,6 @@ EXE = 02_simple_reduce.host
KOKKOS_DEVICES = "OpenMP"
KOKKOS_ARCH = "SNB"
endif
ifneq (,$(findstring ROCm,$(KOKKOS_DEVICES)))
CXX = /opt/rocm/hcc/bin/clang++
CXXFLAGS = -O3
LINK = ${CXX}
LDFLAGS =
EXE = 02_simple_reduce.rocm
KOKKOS_DEVICES = "ROCm"
KOKKOS_ARCH = "Fiji"
endif
DEPFLAGS = -M
@ -49,7 +40,7 @@ $(EXE): $(OBJ) $(KOKKOS_LINK_DEPENDS)
$(LINK) $(KOKKOS_LDFLAGS) $(LDFLAGS) $(EXTRA_PATH) $(OBJ) $(KOKKOS_LIBS) $(LIB) -o $(EXE)
clean: kokkos-clean
rm -f *.o *.cuda *.host *.rocm
rm -f *.o *.cuda *.host
# Compilation rules

11
lib/kokkos/example/tutorial/02_simple_reduce_lambda/Makefile
View File

@ -24,15 +24,6 @@ EXE = 02_simple_reduce_lambda.host
KOKKOS_DEVICES = "OpenMP"
KOKKOS_ARCH = "SNB"
endif
ifneq (,$(findstring ROCm,$(KOKKOS_DEVICES)))
CXX = /opt/rocm/hcc/bin/clang++
CXXFLAGS = -O3
LINK = ${CXX}
LDFLAGS =
EXE = 02_simple_reduce_lambda.rocm
KOKKOS_DEVICES = "ROCm"
KOKKOS_ARCH = "Fiji"
endif
DEPFLAGS = -M
@ -51,7 +42,7 @@ $(EXE): $(OBJ) $(KOKKOS_LINK_DEPENDS)
$(LINK) $(KOKKOS_LDFLAGS) $(LDFLAGS) $(EXTRA_PATH) $(OBJ) $(KOKKOS_LIBS) $(LIB) -o $(EXE)
clean: kokkos-clean
rm -f *.o *.cuda *.host *.rocm
rm -f *.o *.cuda *.host
# Compilation rules

11
lib/kokkos/example/tutorial/03_simple_view/Makefile
View File

@ -23,15 +23,6 @@ EXE = 03_simple_view.host
KOKKOS_DEVICES = "OpenMP"
KOKKOS_ARCH = "SNB"
endif
ifneq (,$(findstring ROCm,$(KOKKOS_DEVICES)))
CXX = /opt/rocm/hcc/bin/clang++
CXXFLAGS = -O3
LINK = ${CXX}
LDFLAGS =
EXE = 03_simple_view.rocm
KOKKOS_DEVICES = "ROCm"
KOKKOS_ARCH = "Fiji"
endif
DEPFLAGS = -M
@ -51,7 +42,7 @@ $(EXE): $(OBJ) $(KOKKOS_LINK_DEPENDS)
$(LINK) $(KOKKOS_LDFLAGS) $(LDFLAGS) $(EXTRA_PATH) $(OBJ) $(KOKKOS_LIBS) $(LIB) -o $(EXE)
clean: kokkos-clean
rm -f *.o *.cuda *.host *.rocm
rm -f *.o *.cuda *.host
# Compilation rules

13
lib/kokkos/example/tutorial/03_simple_view_lambda/CMakeLists.txt
View File

@ -2,11 +2,8 @@
KOKKOS_INCLUDE_DIRECTORIES(${CMAKE_CURRENT_BINARY_DIR})
KOKKOS_INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR})
IF (Kokkos_ENABLE_CXX11)
# This is a tutorial, not a test, so we don't ask CTest to run it.
KOKKOS_ADD_EXECUTABLE(
tutorial_03_simple_view_lambda
SOURCES simple_view_lambda.cpp
COMM serial mpi
)
ENDIF ()
# This is a tutorial, not a test, so we don't ask CTest to run it.
KOKKOS_ADD_EXECUTABLE(
tutorial_03_simple_view_lambda
SOURCES simple_view_lambda.cpp
)

11
lib/kokkos/example/tutorial/03_simple_view_lambda/Makefile
View File

@ -24,15 +24,6 @@ EXE = 03_simple_view_lambda.host
KOKKOS_DEVICES = "OpenMP"
KOKKOS_ARCH = "SNB"
endif
ifneq (,$(findstring ROCm,$(KOKKOS_DEVICES)))
CXX = /opt/rocm/hcc/bin/clang++
CXXFLAGS = -O3
LINK = ${CXX}
LDFLAGS =
EXE = 03_simple_view_lambda.rocm
KOKKOS_DEVICES = "ROCm"
KOKKOS_ARCH = "Fiji"
endif
DEPFLAGS = -M
@ -51,7 +42,7 @@ $(EXE): $(OBJ) $(KOKKOS_LINK_DEPENDS)
$(LINK) $(KOKKOS_LDFLAGS) $(LDFLAGS) $(EXTRA_PATH) $(OBJ) $(KOKKOS_LIBS) $(LIB) -o $(EXE)
clean: kokkos-clean
rm -f *.o *.cuda *.host *.rocm
rm -f *.o *.cuda *.host
# Compilation rules

11
lib/kokkos/example/tutorial/04_simple_memoryspaces/Makefile
View File

@ -23,15 +23,6 @@ EXE = 04_simple_memoryspaces.host
KOKKOS_DEVICES = "OpenMP"
KOKKOS_ARCH = "SNB"
endif
ifneq (,$(findstring ROCm,$(KOKKOS_DEVICES)))
CXX = /opt/rocm/hcc/bin/clang++
CXXFLAGS = -O3
LINK = ${CXX}
LDFLAGS =
EXE = 04_simple_memoryspaces.rocm
KOKKOS_DEVICES = "ROCm"
KOKKOS_ARCH = "Fiji"
endif
DEPFLAGS = -M
@ -50,7 +41,7 @@ $(EXE): $(OBJ) $(KOKKOS_LINK_DEPENDS)
$(LINK) $(KOKKOS_LDFLAGS) $(LDFLAGS) $(EXTRA_PATH) $(OBJ) $(KOKKOS_LIBS) $(LIB) -o $(EXE)
clean: kokkos-clean
rm -f *.o *.cuda *.host *.rocm
rm -f *.o *.cuda *.host
# Compilation rules

11
lib/kokkos/example/tutorial/05_simple_atomics/Makefile
View File

@ -23,15 +23,6 @@ EXE = 05_simple_atomics.host
KOKKOS_DEVICES = "OpenMP"
KOKKOS_ARCH = "SNB"
endif
ifneq (,$(findstring ROCm,$(KOKKOS_DEVICES)))
CXX = /opt/rocm/hcc/bin/clang++
CXXFLAGS = -O3
LINK = ${CXX}
LDFLAGS =
EXE = 05_simple_atomics.rocm
KOKKOS_DEVICES = "ROCm"
KOKKOS_ARCH = "Fiji"
endif
DEPFLAGS = -M
@ -50,7 +41,7 @@ $(EXE): $(OBJ) $(KOKKOS_LINK_DEPENDS)
$(LINK) $(KOKKOS_LDFLAGS) $(LDFLAGS) $(EXTRA_PATH) $(OBJ) $(KOKKOS_LIBS) $(LIB) -o $(EXE)
clean: kokkos-clean
rm -f *.o *.cuda *.host *.rocm
rm -f *.o *.cuda *.host
# Compilation rules

11
lib/kokkos/example/tutorial/Advanced_Views/01_data_layouts/Makefile
View File

@ -23,15 +23,6 @@ EXE = 01_data_layouts.host
KOKKOS_DEVICES = "OpenMP"
KOKKOS_ARCH = "SNB"
endif
ifneq (,$(findstring ROCm,$(KOKKOS_DEVICES)))
CXX = /opt/rocm/hcc/bin/clang++
CXXFLAGS = -O3
LINK = ${CXX}
LDFLAGS =
EXE = 01_data_layouts.rocm
KOKKOS_DEVICES = "ROCm"
KOKKOS_ARCH = "Fiji"
endif
DEPFLAGS = -M
@ -50,7 +41,7 @@ $(EXE): $(OBJ) $(KOKKOS_LINK_DEPENDS)
$(LINK) $(KOKKOS_LDFLAGS) $(LDFLAGS) $(EXTRA_PATH) $(OBJ) $(KOKKOS_LIBS) $(LIB) -o $(EXE)
clean: kokkos-clean
rm -f *.o *.cuda *.host *.rocm
rm -f *.o *.cuda *.host
# Compilation rules

11
lib/kokkos/example/tutorial/Advanced_Views/02_memory_traits/Makefile
View File

@ -23,15 +23,6 @@ EXE = 02_memory_traits.host
KOKKOS_DEVICES = "OpenMP"
KOKKOS_ARCH = "SNB"
endif
ifneq (,$(findstring ROCm,$(KOKKOS_DEVICES)))
CXX = /opt/rocm/hcc/bin/clang++
CXXFLAGS = -O3
LINK = ${CXX}
LDFLAGS =
EXE = 02_memory_traits.rocm
KOKKOS_DEVICES = "ROCm"
KOKKOS_ARCH = "Fiji"
endif
DEPFLAGS = -M
@ -50,7 +41,7 @@ $(EXE): $(OBJ) $(KOKKOS_LINK_DEPENDS)
$(LINK) $(KOKKOS_LDFLAGS) $(LDFLAGS) $(EXTRA_PATH) $(OBJ) $(KOKKOS_LIBS) $(LIB) -o $(EXE)
clean: kokkos-clean
rm -f *.o *.cuda *.host *.rocm
rm -f *.o *.cuda *.host
# Compilation rules

11
lib/kokkos/example/tutorial/Advanced_Views/03_subviews/Makefile
View File

@ -23,15 +23,6 @@ EXE = 03_subviews.host
KOKKOS_DEVICES = "OpenMP"
KOKKOS_ARCH = "SNB"
endif
ifneq (,$(findstring ROCm,$(KOKKOS_DEVICES)))
CXX = /opt/rocm/hcc/bin/clang++
CXXFLAGS = -O3
LINK = ${CXX}
LDFLAGS =
EXE = 03_subviews.rocm
KOKKOS_DEVICES = "ROCm"
KOKKOS_ARCH = "Fiji"
endif
DEPFLAGS = -M
@ -50,7 +41,7 @@ $(EXE): $(OBJ) $(KOKKOS_LINK_DEPENDS)
$(LINK) $(KOKKOS_LDFLAGS) $(LDFLAGS) $(EXTRA_PATH) $(OBJ) $(KOKKOS_LIBS) $(LIB) -o $(EXE)
clean: kokkos-clean
rm -f *.o *.cuda *.host *.rocm
rm -f *.o *.cuda *.host
# Compilation rules

11
lib/kokkos/example/tutorial/Advanced_Views/04_dualviews/Makefile
View File

@ -23,15 +23,6 @@ EXE = 04_dualviews.host
KOKKOS_DEVICES = "OpenMP"
KOKKOS_ARCH = "SNB"
endif
ifneq (,$(findstring ROCm,$(KOKKOS_DEVICES)))
CXX = /opt/rocm/hcc/bin/clang++
CXXFLAGS = -O3
LINK = ${CXX}
LDFLAGS =
EXE = 04_dualviews.rocm
KOKKOS_DEVICES = "ROCm"
KOKKOS_ARCH = "Fiji"
endif
DEPFLAGS = -M
@ -50,7 +41,7 @@ $(EXE): $(OBJ) $(KOKKOS_LINK_DEPENDS)
$(LINK) $(KOKKOS_LDFLAGS) $(LDFLAGS) $(EXTRA_PATH) $(OBJ) $(KOKKOS_LIBS) $(LIB) -o $(EXE)
clean: kokkos-clean
rm -f *.o *.cuda *.host *.rocm
rm -f *.o *.cuda *.host
# Compilation rules

11
lib/kokkos/example/tutorial/Advanced_Views/06_AtomicViews/Makefile
View File

@ -23,15 +23,6 @@ EXE = 06_AtomicViews.host
KOKKOS_DEVICES = "OpenMP"
KOKKOS_ARCH = "SNB"
endif
ifneq (,$(findstring ROCm,$(KOKKOS_DEVICES)))
CXX = /opt/rocm/hcc/bin/clang++
CXXFLAGS = -O3
LINK = ${CXX}
LDFLAGS =
EXE = 06_AtomicViews.rocm
KOKKOS_DEVICES = "ROCm"
KOKKOS_ARCH = "Fiji"
endif
DEPFLAGS = -M
@ -50,7 +41,7 @@ $(EXE): $(OBJ) $(KOKKOS_LINK_DEPENDS)
$(LINK) $(KOKKOS_LDFLAGS) $(LDFLAGS) $(EXTRA_PATH) $(OBJ) $(KOKKOS_LIBS) $(LIB) -o $(EXE)
clean: kokkos-clean
rm -f *.o *.cuda *.host *.rocm
rm -f *.o *.cuda *.host
# Compilation rules

11
lib/kokkos/example/tutorial/Algorithms/01_random_numbers/Makefile
View File

@ -23,15 +23,6 @@ EXE = 01_random_numbers.host
KOKKOS_DEVICES = "OpenMP"
KOKKOS_ARCH = "SNB"
endif
ifneq (,$(findstring ROCm,$(KOKKOS_DEVICES)))
CXX = /opt/rocm/hcc/bin/clang++
CXXFLAGS = -O3
LINK = ${CXX}
LDFLAGS =
EXE = 01_random_numbers.rocm
KOKKOS_DEVICES = "ROCm"
KOKKOS_ARCH = "Fiji"
endif
DEPFLAGS = -M
@ -50,7 +41,7 @@ $(EXE): $(OBJ) $(KOKKOS_LINK_DEPENDS)
$(LINK) $(KOKKOS_LDFLAGS) $(LDFLAGS) $(EXTRA_PATH) $(OBJ) $(KOKKOS_LIBS) $(LIB) -o $(EXE)
clean: kokkos-clean
rm -f *.o *.cuda *.host *.rocm
rm -f *.o *.cuda *.host
# Compilation rules

11
lib/kokkos/example/tutorial/Hierarchical_Parallelism/01_thread_teams/Makefile
View File

@ -23,15 +23,6 @@ EXE = 01_thread_teams.host
KOKKOS_DEVICES = "OpenMP"
KOKKOS_ARCH = "SNB"
endif
ifneq (,$(findstring ROCm,$(KOKKOS_DEVICES)))
CXX = /opt/rocm/hcc/bin/clang++
CXXFLAGS = -O3
LINK = ${CXX}
LDFLAGS =
EXE = 01_thread_teams.rocm
KOKKOS_DEVICES = "ROCm"
KOKKOS_ARCH = "Fiji"
endif
DEPFLAGS = -M
@ -50,7 +41,7 @@ $(EXE): $(OBJ) $(KOKKOS_LINK_DEPENDS)
$(LINK) $(KOKKOS_LDFLAGS) $(LDFLAGS) $(EXTRA_PATH) $(OBJ) $(KOKKOS_LIBS) $(LIB) -o $(EXE)
clean: kokkos-clean
rm -f *.o *.cuda *.host *.rocm
rm -f *.o *.cuda *.host
# Compilation rules

11
lib/kokkos/example/tutorial/Hierarchical_Parallelism/01_thread_teams_lambda/Makefile
View File

@ -24,15 +24,6 @@ EXE = 01_thread_teams_lambda.host
KOKKOS_DEVICES = "OpenMP"
KOKKOS_ARCH = "SNB"
endif
ifneq (,$(findstring ROCm,$(KOKKOS_DEVICES)))
CXX = /opt/rocm/hcc/bin/clang++
CXXFLAGS = -O3
LINK = ${CXX}
LDFLAGS =
EXE = 01_thread_teams_lambda.rocm
KOKKOS_DEVICES = "ROCm"
KOKKOS_ARCH = "Fiji"
endif
DEPFLAGS = -M
@ -51,7 +42,7 @@ $(EXE): $(OBJ) $(KOKKOS_LINK_DEPENDS)
$(LINK) $(KOKKOS_LDFLAGS) $(LDFLAGS) $(EXTRA_PATH) $(OBJ) $(KOKKOS_LIBS) $(LIB) -o $(EXE)
clean: kokkos-clean
rm -f *.o *.cuda *.host *.rocm
rm -f *.o *.cuda *.host
# Compilation rules

11
lib/kokkos/example/tutorial/Hierarchical_Parallelism/02_nested_parallel_for/Makefile
View File

@ -23,15 +23,6 @@ EXE = 02_nested_parallel_for.host
KOKKOS_DEVICES = "OpenMP"
KOKKOS_ARCH = "SNB"
endif
ifneq (,$(findstring ROCm,$(KOKKOS_DEVICES)))
CXX = /opt/rocm/hcc/bin/clang++
CXXFLAGS = -O3
LINK = ${CXX}
LDFLAGS =
EXE = 02_nested_parallel_for.rocm
KOKKOS_DEVICES = "ROCm"
KOKKOS_ARCH = "Fiji"
endif
DEPFLAGS = -M
@ -50,7 +41,7 @@ $(EXE): $(OBJ) $(KOKKOS_LINK_DEPENDS)
$(LINK) $(KOKKOS_LDFLAGS) $(LDFLAGS) $(EXTRA_PATH) $(OBJ) $(KOKKOS_LIBS) $(LIB) -o $(EXE)
clean: kokkos-clean
rm -f *.o *.cuda *.host *.rocm
rm -f *.o *.cuda *.host
# Compilation rules

11
lib/kokkos/example/tutorial/Hierarchical_Parallelism/03_vectorization/Makefile
View File

@ -23,15 +23,6 @@ EXE = 03_vectorization.host
KOKKOS_DEVICES = "OpenMP"
KOKKOS_ARCH = "SNB"
endif
ifneq (,$(findstring ROCm,$(KOKKOS_DEVICES)))
CXX = /opt/rocm/hcc/bin/clang++
CXXFLAGS = -O3
LINK = ${CXX}
LDFLAGS =
EXE = 03_vectorization.rocm
KOKKOS_DEVICES = "ROCm"
KOKKOS_ARCH = "Fiji"
endif
DEPFLAGS = -M
@ -50,7 +41,7 @@ $(EXE): $(OBJ) $(KOKKOS_LINK_DEPENDS)
$(LINK) $(KOKKOS_LDFLAGS) $(LDFLAGS) $(EXTRA_PATH) $(OBJ) $(KOKKOS_LIBS) $(LIB) -o $(EXE)
clean: kokkos-clean
rm -f *.o *.cuda *.host *.rocm
rm -f *.o *.cuda *.host
# Compilation rules

11
lib/kokkos/example/tutorial/Hierarchical_Parallelism/04_team_scan/Makefile
View File

@ -23,15 +23,6 @@ EXE = 04_team_scan.host
KOKKOS_DEVICES = "OpenMP"
KOKKOS_ARCH = "SNB"
endif
ifneq (,$(findstring ROCm,$(KOKKOS_DEVICES)))
CXX = /opt/rocm/hcc/bin/clang++
CXXFLAGS = -O3
LINK = ${CXX}
LDFLAGS =
EXE = 04_team_scan.rocm
KOKKOS_DEVICES = "ROCm"
KOKKOS_ARCH = "Fiji"
endif
DEPFLAGS = -M
@ -50,7 +41,7 @@ $(EXE): $(OBJ) $(KOKKOS_LINK_DEPENDS)
$(LINK) $(KOKKOS_LDFLAGS) $(LDFLAGS) $(EXTRA_PATH) $(OBJ) $(KOKKOS_LIBS) $(LIB) -o $(EXE)
clean: kokkos-clean
rm -f *.o *.cuda *.host *.rocm
rm -f *.o *.cuda *.host
# Compilation rules

11
lib/kokkos/example/tutorial/launch_bounds/Makefile
View File

@ -23,15 +23,6 @@ EXE = launch_bounds.host
KOKKOS_DEVICES = "OpenMP"
KOKKOS_ARCH = "SNB"
endif
ifneq (,$(findstring ROCm,$(KOKKOS_DEVICES)))
CXX = /opt/rocm/hcc/bin/clang++
CXXFLAGS = -O3
LINK = ${CXX}
LDFLAGS =
EXE = launch_bounds.rocm
KOKKOS_DEVICES = "ROCm"
KOKKOS_ARCH = "Fiji"
endif
# WAR for "undefined memcpy" w/ Ubuntu + CUDA 7.5
@ -58,7 +49,7 @@ $(EXE): $(OBJ) $(KOKKOS_LINK_DEPENDS)
$(LINK) $(KOKKOS_LDFLAGS) $(LDFLAGS) $(EXTRA_PATH) $(OBJ) $(KOKKOS_LIBS) $(LIB) -o $(EXE)
clean: kokkos-clean
rm -f *.o *.cuda *.rocm
rm -f *.o *.cuda
# Compilation rules