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@ -3629,7 +3629,7 @@ void PairReaxCKokkos<DeviceType>::v_tally3_atom(EV_FLOAT_REAX &ev, const int &i,
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/* ----------------------------------------------------------------------
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/* ----------------------------------------------------------------------
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setup for energy, virial computation
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setup for energy, virial computation
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see integrate::ev_set() for values of eflag (0-3) and vflag (0-6)
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see integrate::ev_set() for values of eflag and vflag
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------------------------------------------------------------------------- */
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------------------------------------------------------------------------- */
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template<class DeviceType>
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template<class DeviceType>
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@ -3645,7 +3645,7 @@ void PairReaxCKokkos<DeviceType>::ev_setup(int eflag, int vflag, int)
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vflag_either = vflag;
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vflag_either = vflag;
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vflag_global = vflag & (VIRIAL_PAIR | VIRIAL_FDOTR);
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vflag_global = vflag & (VIRIAL_PAIR | VIRIAL_FDOTR);
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vflag_atom = vflag / 4; // TODO
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vflag_atom = vflag & (VIRIAL_ATOM | VIRIAL_CENTROID);
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// reallocate per-atom arrays if necessary
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// reallocate per-atom arrays if necessary
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@ -3673,11 +3673,11 @@ void PairReaxCKokkos<DeviceType>::ev_setup(int eflag, int vflag, int)
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Kokkos::parallel_for(Kokkos::RangePolicy<DeviceType, PairReaxZeroVAtom>(0,maxvatom),*this);
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Kokkos::parallel_for(Kokkos::RangePolicy<DeviceType, PairReaxZeroVAtom>(0,maxvatom),*this);
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}
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}
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// if vflag_global = 2 and pair::compute() calls virial_fdotr_compute()
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// if vflag_global = VIRIAL_FDOTR and pair::compute() calls virial_fdotr_compute()
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// compute global virial via (F dot r) instead of via pairwise summation
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// compute global virial via (F dot r) instead of via pairwise summation
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// unset other flags as appropriate
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// unset other flags as appropriate
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if (vflag_global == 2 && no_virial_fdotr_compute == 0) {
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if (vflag_global == VIRIAL_FDOTR && no_virial_fdotr_compute == 0) {
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vflag_fdotr = 1;
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vflag_fdotr = 1;
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vflag_global = 0;
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vflag_global = 0;
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if (vflag_atom == 0) vflag_either = 0;
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if (vflag_atom == 0) vflag_either = 0;
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15
src/fix.cpp
15
src/fix.cpp
@ -16,6 +16,7 @@
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#include "atom.h"
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#include "atom.h"
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#include "atom_masks.h"
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#include "atom_masks.h"
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#include "error.h"
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#include "error.h"
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#include "force.h"
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#include "group.h"
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#include "group.h"
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#include "memory.h"
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#include "memory.h"
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@ -189,12 +190,12 @@ void Fix::ev_setup(int eflag, int vflag)
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evflag = 1;
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evflag = 1;
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eflag_either = eflag;
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eflag_either = eflag;
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eflag_global = eflag % 2; // TODO
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eflag_global = eflag & ENERGY_GLOBAL;
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eflag_atom = eflag / 2; // TODO
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eflag_atom = eflag & ENERGY_ATOM;
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vflag_either = vflag;
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vflag_either = vflag;
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vflag_global = vflag % 4; // TODO
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vflag_global = vflag & (VIRIAL_PAIR | VIRIAL_FDOTR);
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vflag_atom = vflag / 4; // TODO
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vflag_atom = vflag & (VIRIAL_ATOM | VIRIAL_CENTROID);
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// reallocate per-atom arrays if necessary
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// reallocate per-atom arrays if necessary
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@ -234,7 +235,7 @@ void Fix::ev_setup(int eflag, int vflag)
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/* ----------------------------------------------------------------------
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/* ----------------------------------------------------------------------
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if thermo_virial is on:
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if thermo_virial is on:
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setup for virial computation
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setup for virial computation
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see integrate::ev_set() for values of vflag (0-6)
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see integrate::ev_set() for values of vflag
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fixes call this if use v_tally()
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fixes call this if use v_tally()
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else: set evflag=0
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else: set evflag=0
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------------------------------------------------------------------------- */
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------------------------------------------------------------------------- */
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@ -250,8 +251,8 @@ void Fix::v_setup(int vflag)
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evflag = 1;
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evflag = 1;
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vflag_global = vflag % 4; // TODO
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vflag_global = vflag & (VIRIAL_PAIR | VIRIAL_FDOTR);
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vflag_atom = vflag / 4; // TODO
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vflag_atom = vflag & (VIRIAL_ATOM | VIRIAL_CENTROID);
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// reallocate per-atom array if necessary
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// reallocate per-atom array if necessary
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@ -221,7 +221,7 @@ void KSpace::pair_check()
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eflag_atom = 1 if ENERGY_ATOM bit of eflag set
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eflag_atom = 1 if ENERGY_ATOM bit of eflag set
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eflag_either = 1 if eflag_global or eflag_atom is set
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eflag_either = 1 if eflag_global or eflag_atom is set
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vflag_global = 1 if VIRIAL_PAIR or VIRIAL_FDOTR bit of vflag set
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vflag_global = 1 if VIRIAL_PAIR or VIRIAL_FDOTR bit of vflag set
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vflag_atom = 1 if VIRIAL_ATOM bit of vflag set
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vflag_atom = 1 if VIRIAL_ATOM or VIRIAL_CENTROID bit of vflag set
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vflag_either = 1 if vflag_global or vflag_atom is set
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vflag_either = 1 if vflag_global or vflag_atom is set
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------------------------------------------------------------------------- */
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------------------------------------------------------------------------- */
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@ -237,7 +237,7 @@ void KSpace::ev_setup(int eflag, int vflag, int alloc)
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vflag_either = vflag;
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vflag_either = vflag;
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vflag_global = vflag & (VIRIAL_PAIR | VIRIAL_FDOTR);
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vflag_global = vflag & (VIRIAL_PAIR | VIRIAL_FDOTR);
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vflag_atom = vflag / 4; // TODO
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vflag_atom = vflag & (VIRIAL_ATOM | VIRIAL_CENTROID);
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if (eflag_atom || vflag_atom) evflag_atom = 1;
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if (eflag_atom || vflag_atom) evflag_atom = 1;
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else evflag_atom = 0;
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else evflag_atom = 0;
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25
src/min.cpp
25
src/min.cpp
@ -798,25 +798,20 @@ void Min::ev_setup()
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}
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}
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/* ----------------------------------------------------------------------
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/* ----------------------------------------------------------------------
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TODO: comment
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set eflag,vflag for current iteration
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set eflag,vflag for current iteration
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invoke matchstep() on all timestep-dependent computes to clear their arrays
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invoke matchstep() on all timestep-dependent computes to clear their arrays
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eflag/vflag based on computes that need info on this ntimestep
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eflag/vflag based on computes that need info on this ntimestep
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always set eflag_global = 1, since need energy every iteration
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always set eflag_global = 1, since need energy every iteration
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eflag = 0 = no energy computation
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eflag: set any or no bits
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eflag = 1 = global energy only
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ENERGY_GLOBAL bit for global energy
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eflag = 2 = per-atom energy only
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ENERGY_ATOM bit for per-atom energy
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eflag = 3 = both global and per-atom energy
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vflag: set any or no bits, but GLOBAL/FDOTR bit cannot both be set
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vflag = 0 = no virial computation (pressure)
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VIRIAL_PAIR bit for global virial as sum of pairwise terms
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vflag = 1 = global virial with pair portion via sum of pairwise interactions
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VIRIAL_FDOTR bit for global virial via F dot r
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vflag = 2 = global virial with pair portion via F dot r including ghosts
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VIRIAL_ATOM bit for per-atom virial
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vflag = 4 = per-atom virial only
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VIRIAL_CENTROID bit for per-atom centroid virial
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vflag = 5 or 6 = both global and per-atom virial
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all force components (pair,bond,angle,...,kspace) use eflag/vflag
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vflag = 8 = per-atom centroid virial only
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in their ev_setup() method to set local energy/virial flags
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vflag = 9 or 10 = both global and per-atom centroid virial
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vflag = 12 = both per-atom virial and per-atom centroid virial
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vflag = 13 or 15 = global, per-atom virial and per-atom centroid virial
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------------------------------------------------------------------------- */
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------------------------------------------------------------------------- */
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void Min::ev_set(bigint ntimestep)
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void Min::ev_set(bigint ntimestep)
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