git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5400 f3b2605a-c512-4ea7-a41b-209d697bcdaa

doc/Section_tools.html

@@ -63,6 +63,7 @@ own sub-directories with their own Makefiles.
 <LI><A HREF = "#msi">msi2lmp</A>
 <LI><A HREF = "#pymol">pymol_asphere</A>
 <LI><A HREF = "#pythontools">python</A>
+<LI><A HREF = "#reax">reax</A>
 <LI><A HREF = "#restart">restart2data</A>
 <LI><A HREF = "#thermo_extract">thermo_extract</A>
 <LI><A HREF = "#vim">vim</A>
@@ -345,7 +346,7 @@ examples directory within pymol_asphere for more information.
 <H4><A NAME = "pythontools"></A>python tool 
 </H4>
 <P>The python sub-directory contains several Python scripts
-that perform common LAMMPS post-processing tasks, like
+that perform common LAMMPS post-processing tasks, such as:
 </P>
 <UL><LI>extract thermodynamic info from a log file as columns of numbers
 <LI>plot two columns of thermodynamic info from a log file using GnuPlot
@@ -358,6 +359,17 @@ README for more info on Pizza.py and how to use these scripts.
 </P>
 <HR>
 
+<H4><A NAME = "reax"></A>reax tool 
+</H4>
+<P>The reax sub-directory contains stand-alond codes that can
+post-process the output of the <A HREF = "fix_reax_bonds.html">fix reax/bonds</A>
+command from a LAMMPS simulation using <A HREF = "pair_reax.html">ReaxFF</A>.  See
+the README.txt file for more info.
+</P>
+<P>These tools were written by Aidan Thompson at Sandia.
+</P>
+<HR>
+
 <H4><A NAME = "restart"></A>restart2data tool 
 </H4>
 <P>The file restart2data.cpp converts a binary LAMMPS restart file into

doc/Section_tools.txt

@@ -59,6 +59,7 @@ own sub-directories with their own Makefiles.
 "msi2lmp"_#msi
 "pymol_asphere"_#pymol
 "python"_#pythontools
+"reax"_#reax
 "restart2data"_#restart
 "thermo_extract"_#thermo_extract
 "vim"_#vim
@@ -341,7 +342,7 @@ This tool was written by Mike Brown at Sandia.
 python tool :h4,link(pythontools)
 
 The python sub-directory contains several Python scripts
-that perform common LAMMPS post-processing tasks, like
+that perform common LAMMPS post-processing tasks, such as:
 
 extract thermodynamic info from a log file as columns of numbers
 plot two columns of thermodynamic info from a log file using GnuPlot
@@ -354,6 +355,17 @@ README for more info on Pizza.py and how to use these scripts.
 
 :line
 
+reax tool :h4,link(reax)
+
+The reax sub-directory contains stand-alond codes that can
+post-process the output of the "fix reax/bonds"_fix_reax_bonds.html
+command from a LAMMPS simulation using "ReaxFF"_pair_reax.html.  See
+the README.txt file for more info.
+
+These tools were written by Aidan Thompson at Sandia.
+
+:line
+
 restart2data tool :h4,link(restart)
 
 The file restart2data.cpp converts a binary LAMMPS restart file into