address spellcheck issues
This commit is contained in:
@ -61,7 +61,7 @@ ones. This can be useful in several scenarios.
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If the atom style does not define molecule IDs, per-atom charge, or
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If the atom style does not define molecule IDs, per-atom charge, or
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per-atom mass, they can be added using the *mol*\ , *q* or *rmass*
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per-atom mass, they can be added using the *mol*\ , *q* or *rmass*
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keywords. This ciykd be useful to define "molecules" to use as rigid
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keywords. This could be useful to define "molecules" to use as rigid
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bodies with the :doc:`fix rigid <fix_rigid>` command, or to carry
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bodies with the :doc:`fix rigid <fix_rigid>` command, or to carry
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around an extra flag with atoms (stored as a molecule ID) that can be
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around an extra flag with atoms (stored as a molecule ID) that can be
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used by various commands like :doc:`compute chunk/atom
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used by various commands like :doc:`compute chunk/atom
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@ -150,7 +150,7 @@ Per-atom properties that are defined by the :doc:`atom style
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<atom_style>` are initialized when atoms are created, e.g. by the
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<atom_style>` are initialized when atoms are created, e.g. by the
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:doc:`read_data <read_data>` or :doc:`create_atoms <create_atoms>`
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:doc:`read_data <read_data>` or :doc:`create_atoms <create_atoms>`
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commands. The per-atom properties defined by this fix are not. So
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commands. The per-atom properties defined by this fix are not. So
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you need to initialize them explicitly. One way to do thisis
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you need to initialize them explicitly. One way to do this is
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:doc:`read_data <read_data>` command, using its *fix* keyword and
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:doc:`read_data <read_data>` command, using its *fix* keyword and
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passing it the fix-ID of this fix.
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passing it the fix-ID of this fix.
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@ -178,7 +178,7 @@ would allow a data file to have a section like this:
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where N is the number of atoms, the first field on each line is the
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where N is the number of atoms, the first field on each line is the
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atom-ID, the next two are a molecule-ID and a floating point value
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atom-ID, the next two are a molecule-ID and a floating point value
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that will be stored in a new property called "flag". If a per-atom
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that will be stored in a new property called "flag". If a per-atom
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array was specified in the fix property/atom commmand then the *N*
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array was specified in the fix property/atom command then the *N*
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values for that array must be specified consecutively for that
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values for that array must be specified consecutively for that
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property on each line. Note that the order of values on each line
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property on each line. Note that the order of values on each line
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corresponds to the order of custom names in the fix property/atom
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corresponds to the order of custom names in the fix property/atom
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@ -222,7 +222,7 @@ values. This means that the values can be used accessed by fixes like
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:doc:`compute reduce <compute_reduce>`, or used in :doc:`atom-style
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:doc:`compute reduce <compute_reduce>`, or used in :doc:`atom-style
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variables <variable>`.
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variables <variable>`.
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For example, these commands will output both the instantanous and
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For example, these commands will output both the instantaneous and
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time-averaged values of two new properties to a custom dump file:
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time-averaged values of two new properties to a custom dump file:
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.. code-block:: LAMMPS
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.. code-block:: LAMMPS
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@ -531,6 +531,7 @@ covalently
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covariance
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covariance
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cpp
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cpp
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cpu
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cpu
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cradius
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createatoms
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createatoms
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createAtoms
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createAtoms
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CreateIDs
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CreateIDs
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@ -1598,6 +1599,7 @@ Kosovan
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Koster
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Koster
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Kosztin
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Kosztin
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Kp
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Kp
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kradius
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Kraker
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Kraker
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Kraus
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Kraus
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Kremer
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Kremer
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@ -1993,6 +1995,7 @@ Mj
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mK
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mK
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mkdir
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mkdir
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mkv
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mkv
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mlength
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mliap
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mliap
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mliappy
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mliappy
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mlparks
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mlparks
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@ -2049,6 +2052,7 @@ mpiio
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mpirun
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mpirun
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mplayer
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mplayer
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mps
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mps
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mradius
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Mrovec
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Mrovec
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Mryglod
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Mryglod
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mscg
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mscg
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@ -2107,6 +2111,7 @@ myIndex
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mylammps
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mylammps
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MyPool
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MyPool
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mysocket
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mysocket
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mySpin
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myTemp
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myTemp
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myVec
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myVec
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na
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na
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@ -2317,6 +2322,7 @@ nsub
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Nswap
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Nswap
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Nt
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Nt
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Ntable
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Ntable
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nt
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ntheta
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ntheta
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nthreads
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nthreads
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ntimestep
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ntimestep
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