Merge branch 'develop' into type-labels

This commit is contained in:
Jacob Gissinger
2022-08-08 17:16:50 -04:00
committed by GitHub
4100 changed files with 378596 additions and 127634 deletions

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@ -39,6 +39,18 @@ hr {
display: none;
}
#userdoc.toctree-wrapper.compound p {
display: none;
}
#progdoc.toctree-wrapper.compound p {
display: none;
}
#reference.toctree-wrapper.compound p {
display: none;
}
.ui.tabular.menu .item {
padding-right: 1em;
padding-left: 1em;

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@ -0,0 +1 @@
!*.html

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@ -4,17 +4,8 @@
{% endblock %}
{% block body %}
<div id="search-results">
<script>
(function() {
var cx = '012685039201307511604:um7if1hinba';
var gcse = document.createElement('script');
gcse.type = 'text/javascript';
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var s = document.getElementsByTagName('script')[0];
s.parentNode.insertBefore(gcse, s);
})();
</script>
<gcse:searchresults-only></gcse:searchresults-only>
<script async src="https://cse.google.com/cse.js?cx=000956471495417073164:5ggs_m6ymw0">
</script>
<div class="gcse-search"></div>
</div>
{% endblock %}

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@ -48,6 +48,7 @@ agilio
Agilio
agni
Agnolin
Ahrens
Ai
Aidan
aij
@ -94,6 +95,7 @@ amu
Amzallag
analytical
Anders
Andrienko
Andzelm
Ang
anglegrad
@ -119,6 +121,7 @@ Antonelli
api
Apoorva
Appl
apptainer
Apu
arallel
arccos
@ -239,6 +242,7 @@ benchmarking
Bennet
Berardi
Beraun
Bereau
berendsen
Berendsen
berger
@ -266,6 +270,7 @@ binutils
biomolecular
biomolecule
Biomolecules
biomolecules
Biophys
Biosym
biquadratic
@ -275,6 +280,7 @@ Bispectrum
bitbucket
bitmapped
bitmask
bitorsion
bitrate
bitrates
Bitzek
@ -287,6 +293,7 @@ blocksize
blueviolet
bn
bni
bnumeric
bo
Bochkarev
Bochum
@ -317,6 +324,7 @@ borophene
Botero
Botu
Bouguet
Bourasseau
Bourne
boxcolor
boxhi
@ -330,6 +338,8 @@ boxzlo
bp
bpclermont
bpls
bpm
BPM
br
Branduardi
Branicio
@ -342,6 +352,7 @@ Broglie
brownian
brownw
Broyden
Brusselle
Bryantsev
Btarget
btype
@ -367,6 +378,7 @@ Caltech
Camilloni
Camiloni
Campana
Cangi
Cao
Capolungo
Caro
@ -414,6 +426,8 @@ CGDNA
cgs
cgsdk
CGSDK
cgspica
CGSPICA
Chaimovich
Chalopin
Champaign
@ -436,11 +450,13 @@ chiralIDs
ChiralIDs
chirality
Cho
Chodera
ChooseOffset
chris
Christoph
Chu
chunkID
chunksize
Ciccotti
Cieplak
Cii
@ -510,6 +526,8 @@ configfile
configurational
conformational
Connor
conp
conq
ConstMatrix
Contrib
cooperativity
@ -554,6 +572,7 @@ Crozier
Cryst
Crystallogr
Csanyi
csg
csh
cshrc
CSiC
@ -566,6 +585,7 @@ cstring
cstyle
csvr
ctrl
ctrn
ctypes
Ctypes
cuda
@ -575,6 +595,8 @@ cuFFT
CuH
Cui
Cummins
Cundall
cundall
Curk
Cusentino
customIDs
@ -646,6 +668,7 @@ deepskyblue
defgrad
defn
deformable
Deissenbeck
del
delaystep
deleteIDs
@ -657,6 +680,7 @@ delocalized
Delong
delr
deltaHf
dem
Dendrimer
dendritic
Denniston
@ -671,6 +695,7 @@ Deresiewicz
Derjagin
Derjaguin
Derlet
Desbiens
Deserno
Destree
destructor
@ -681,12 +706,14 @@ devel
Devemy
deviatoric
Devine
dewald
df
dfftw
DFT
dftb
dh
dhex
di
dia
diag
diagonalization
@ -758,6 +785,7 @@ DPD
dpdTheta
dphi
DPhil
dpme
dr
dR
dragforce
@ -779,12 +807,14 @@ dtheta
dtshrink
du
dU
Ducastelle
Dudarev
Duin
Dullweber
dumpfile
Dunbrack
Dunweg
Dupend
Dupont
dUs
dV
@ -860,7 +890,9 @@ Eindhoven
Eisenforschung
Ejtehadi
El
el
elaplong
elastance
Electroneg
electronegative
electronegativity
@ -884,6 +916,7 @@ Embt
emi
emol
eN
endian
energetics
energyCorr
eng
@ -973,6 +1006,7 @@ evector
Everaers
Evgeny
evirials
ew
ewald
Ewald
excitations
@ -1061,9 +1095,11 @@ fld
floralwhite
Florez
flv
fm
fmackay
fmag
fmass
fmatch
fmm
fmt
fmtlib
@ -1149,8 +1185,10 @@ gdot
GeC
Geier
gencode
Geocomputing
georg
Georg
Geotechnica
germain
Germann
Germano
@ -1180,6 +1218,7 @@ Gladky
gld
gle
globbing
Gloor
Glosli
Glotzer
gmail
@ -1237,6 +1276,7 @@ Gubbins
Guenole
Guericke
gui
Guillope
Gumbsch
Gunsteren
Gunzenmuller
@ -1249,6 +1289,7 @@ gzipped
Haak
Hafskjold
halfstepback
halgren
Halperin
Halver
Hamaker
@ -1256,6 +1297,7 @@ Hamel
Hammerschmidt
Hanley
haptic
Haque
Hara
Harpertown
Harting
@ -1298,6 +1340,7 @@ hexatic
hexorder
Heyes
HfO
hftn
hgrid
hhmrr
Hibbs
@ -1306,6 +1349,8 @@ hiID
Hijazi
Hilger
Hinestrosa
hipCUB
hipFFT
histo
histogrammed
histogramming
@ -1319,6 +1364,7 @@ Holm
holonomic
Homebrew
hooke
hookean
Hookean
hostname
hotpink
@ -1418,6 +1464,7 @@ initializations
InitiatorIDs
initio
InP
inq
inregion
instantiation
Institut
@ -1429,6 +1476,7 @@ interal
interatomic
Interatomic
interconvert
interfacial
interial
interlayer
intermolecular
@ -1440,6 +1488,7 @@ intra
intralayer
intramolecular
ints
inumeric
inv
invariants
inversed
@ -1478,6 +1527,7 @@ iva
Ivanov
Ivector
Iw
Iwers
iwyu
ixcm
ixx
@ -1538,6 +1588,7 @@ jpeglib
jpg
JPG
jpl
json
Jth
jtranch
jtype
@ -1593,6 +1644,7 @@ Kemper
kepler
keV
Keyes
keyfile
Khersonskii
Khrapak
Khvostov
@ -1654,6 +1706,7 @@ kTln
ktypeN
Kub
Kubo
Kuksenok
Kumagai
Kumar
Kurebayashi
@ -1664,15 +1717,18 @@ Kuznetsov
kx
labelmap
Labelmap
Lachet
Lackmann
Ladd
lagrangian
lambdai
LambdaLanczos
Lambrecht
lamda
lammps
Lammps
LAMMPS
lammpsbin
lammpsplot
lammpsplugin
Lamoureux
@ -1712,6 +1768,7 @@ lebedeva
Lebedeva
Lebold
Lechman
Legrand
Lehoucq
Leimkuhler
Leite
@ -1741,6 +1798,7 @@ libdl
libfftw
libgcc
libgpu
libinqmdi
libjpeg
libkim
liblammps
@ -1755,6 +1813,7 @@ libplumed
libplumedKernel
libpng
libpoems
libqemdi
libqmmm
librar
libreax
@ -1790,6 +1849,7 @@ Liu
Livermore
lj
llammps
lld
LLVM
lm
lmp
@ -1927,6 +1987,7 @@ maxsize
maxspecial
maxSteps
maxstrain
maxtry
maxwell
Maxwellian
maxX
@ -1962,6 +2023,7 @@ mediumvioletred
Mees
Mehl
Mei
Meissner
Melchor
Meloni
Melrose
@ -1990,6 +2052,7 @@ mesoscopic
metadata
metadynamics
Metadynamics
metallicity
Methfessel
methine
Metin
@ -2037,6 +2100,7 @@ Mishin
Mishra
mistyped
mistyrose
Miyazaki
Mj
mK
mkdir
@ -2048,6 +2112,7 @@ mlparks
Mniszewski
mnt
mobi
Mobley
modc
Modell
modelled
@ -2073,6 +2138,7 @@ monopole
monovalent
Montalenti
Montero
Mora
Morefoo
Morfill
Mori
@ -2097,6 +2163,7 @@ mpiexec
mpiio
mpirun
mplayer
mpole
mps
mradius
Mrovec
@ -2131,6 +2198,7 @@ multicore
multielectron
multinode
multiphysics
Multipole
multiscale
multisectioning
multithreading
@ -2201,8 +2269,10 @@ Navier
nb
Nbin
Nbins
nbodies
nbody
Nbody
nbond
nbonds
nbondtype
Nbondtype
@ -2211,6 +2281,7 @@ Nbondtypes
nBOt
nbrhood
Nbtypes
Nbytes
nc
Nc
nchunk
@ -2238,6 +2309,7 @@ nelem
Nelement
Nelements
nelems
nellipsoids
nemd
netapp
netcdf
@ -2315,6 +2387,7 @@ nodesets
Noehring
Noffset
noforce
noguess
Noid
nolib
nonequilibrium
@ -2323,11 +2396,16 @@ nonGaussian
nonlocal
Nonlocal
Noordhoek
noprecond
nopreliminary
Nord
norder
Nordlund
noremap
normals
normx
normy
normz
Noskov
noslip
noticable
@ -2371,6 +2449,7 @@ Nstep
Nsteplast
Nstop
nsub
Nsw
Nswap
nt
Nt
@ -2380,6 +2459,7 @@ nthreads
ntimestep
Ntptask
Ntriples
ntris
Ntype
ntypes
Ntypes
@ -2422,6 +2502,7 @@ ohenrich
ok
Okabe
Okamoto
Okazaki
O'Keefe
OKeefe
oldlace
@ -2493,6 +2574,7 @@ palegreen
paleturquoise
palevioletred
Panagiotopoulos
Pande
Pandit
Papaconstantopoulos
papayawhip
@ -2527,6 +2609,7 @@ Pavia
Paxton
pbc
pc
pcg
pchain
Pchain
pcmoves
@ -2560,7 +2643,9 @@ Persp
peru
Peskin
Pettifor
pewald
pfactor
pflag
pgi
ph
Philipp
@ -2593,6 +2678,7 @@ pIp
Pisarev
Pishevar
Pitera
pitorsion
pj
pjintve
pKa
@ -2608,6 +2694,7 @@ plt
plumedfile
pmb
pmcmoves
pme
Pmolrotate
Pmoltrans
pN
@ -2623,6 +2710,7 @@ Polarizable
polarizables
polarizer
Politano
Politecnico
polyA
polybond
polydisperse
@ -2630,8 +2718,11 @@ polydispersity
polyelectrolyte
polyhedra
Polym
polymorph
polymorphism
Ponder
popen
Popoola
Popov
popstore
Poresag
@ -2643,10 +2734,12 @@ postfixed
postfixes
Postma
Potapkin
potentiostat
potin
Pourtois
powderblue
PowerShell
ppme
ppn
pppm
Prakash
@ -2656,6 +2749,7 @@ pre
Pre
prec
precession
precond
prefactor
prefactors
prepend
@ -2677,6 +2771,7 @@ pscrozi
pseudodynamics
pseudopotential
pSp
pSPICA
Pstart
Pstop
pstyle
@ -2746,9 +2841,12 @@ qopenmp
qoverride
qqr
qqrd
Qsb
qtb
quadratically
quadrupolar
quadrupole
quadrupoles
Quant
quartic
quat
@ -2760,10 +2858,12 @@ quatk
quatw
queryargs
Queteschiner
quickmin
qw
qx
qy
qz
Rackers
radialscreened
radialscreenedspin
radialspin
@ -2772,6 +2872,7 @@ radians
Rafferty
rahman
Rahman
Rajamanickam
Ralf
Raman
ramped
@ -2781,6 +2882,7 @@ Randisi
randomizations
rann
RANN
Rapetti
Raphson
Rappe
Ravelo
@ -2916,8 +3018,10 @@ Rmin
RMS
rmsd
rnage
rng
rNEMD
ro
rocFFT
Rochus
Rockett
rocksalt
@ -2926,6 +3030,7 @@ Rohart
Ronchetti
Ronevich
Rosati
Rosato
Rosenberger
Rossky
rosybrown
@ -2990,12 +3095,15 @@ Scalable
scalexy
scalexz
scaleyz
Scalfi
Schaik
Scheid
Schilfgarde
Schimansky
Schiotz
Schlitter
Schmid
Schnieders
Schoen
Schotte
Schratt
@ -3008,6 +3116,7 @@ screenshot
screenshots
Scripps
Scripta
sd
sdk
sdpd
SDPD
@ -3025,6 +3134,7 @@ semiaxes
semimetals
Semin
Sensable
Seo
Sep
seqdep
Serpico
@ -3102,9 +3212,11 @@ smallbig
smallint
Smallint
smallsmall
smatb
smd
SMD
smi
Smilauer
Smirichinski
Smit
smtbq
@ -3127,15 +3239,19 @@ Souza
sp
spacings
Spearot
specieslist
specular
spellcheck
Spellmeyer
Speybroeck
sph
SPH
spica
SPICA
Spickermann
splined
spparks
Sprik
Springer
springgreen
spx
@ -3164,6 +3280,7 @@ statvolt
stdin
stdio
stdlib
stdout
steelblue
Stegailov
Steinbach
@ -3172,12 +3289,15 @@ Steinhauser
Stepaniants
stepwise
Stesmans
stiffnesses
Stillinger
stk
stl
stochastically
stochasticity
Stockmayer
Stoddard
Stoermer
stoichiometric
stoichiometry
Stokesian
@ -3356,6 +3476,7 @@ tmin
Tmin
tmp
tN
tnumeric
Tobias
Toennies
Tohoku
@ -3367,6 +3488,7 @@ toolchain
topologies
Toporov
Torder
Torino
torsions
Tosi
Toukmaji
@ -3444,6 +3566,9 @@ Tz
Tzou
ub
Uberuaga
ubflag
Ubflag
ubiquitin
uca
uChem
uCond
@ -3491,17 +3616,20 @@ unsplit
unstrained
untar
untilted
Unwin
uparrow
upenn
upto
Urbakh
Urbana
UreyBradley
Usabiaga
usec
uSemiParallel
userguide
username
usleep
usolve
usr
util
utils
@ -3535,6 +3663,7 @@ Vcm
vdfmax
vdim
vdisplace
vdw
vdW
vdwl
vec
@ -3589,6 +3718,7 @@ Voronoi
VORONOI
Vorselaars
Voth
Voyiatzis
vpz
vratio
Vries
@ -3608,19 +3738,26 @@ vx
Vx
vxcm
vxmu
vxx
vxy
vxz
vy
Vy
vycm
vyy
vyz
vz
Vz
vzcm
vzi
vzz
Waals
Wadley
wallstyle
walltime
Waltham
Waroquier
Wataru
wavepacket
wB
Wbody
@ -3654,6 +3791,8 @@ Wittmaack
wn
Wolde
workflow
workflows
Workum
Worley
Wriggers
Wuppertal
@ -3679,6 +3818,7 @@ Xeon
xflag
xhi
xHost
Xia
Xiaohu
Xiaowang
Xie
@ -3711,6 +3851,8 @@ xy
xyz
xz
xzhou
Yade
yade
yaff
YAFF
Yamada
@ -3733,6 +3875,7 @@ ylat
ylo
ymax
ymin
yml
Yoshida
ys
ysu
@ -3756,6 +3899,7 @@ zcm
zeeman
Zeeman
Zemer
zenodo
Zepeda
zflag
Zhang