Commit Graph

9051 Commits

Author SHA1 Message Date
007f7fbbfb Fixed kT vs k_B T in a couple of places and associated description 2022-08-22 23:46:49 -05:00
0f3c4357c8 Merge branch 'doc-fixes' of github.com:hammondkd/lammps into doc-fixes
Changed some "dof" to "DOF" as per Axel's preference
2022-08-22 23:29:34 -05:00
5d04e88e28 Changed a couple of "dof" to "DOF" as per Axel's preference 2022-08-22 23:29:24 -05:00
c135eb0a5f fix spelling 2022-08-23 00:05:17 -04:00
18f10a6a0d use k_B for Boltzmann constant 2022-08-23 00:04:25 -04:00
0eefdf8a87 Fixed typos; evidently make html is more forgiving than make pdf 2022-08-22 22:03:18 -05:00
88f7e4c7b6 After running "make fix-whitespace" 2022-08-22 21:41:12 -05:00
4d8dc03a3f Edits to fix.rst and additions for missing styles 2022-08-22 21:13:59 -05:00
b96398e5e9 Minor edits to doc pages for echo group if 2022-08-21 22:19:30 -05:00
2259947d52 Edits to documentation files for consistency and math 2022-08-19 23:49:44 -05:00
de0b7bf737 Tweaks to documentation to make it more consistent and machine-readable 2022-08-19 19:25:15 -05:00
d32b303a82 Finished edits on computes (whew!); builds with no errors or warnings 2022-08-19 00:25:06 -05:00
d03f0a6716 More cosmetic edits to documentation 2022-08-18 19:25:06 -05:00
8a9cd4b2b5 Merge branch 'lammps:develop' into doc-fixes 2022-08-18 17:48:47 -05:00
1b979be939 Merge pull request #3392 from akohlmey/minimize-neighbor-check
Update test for neighbor list settings during minimization
2022-08-17 20:55:23 -04:00
c3f57037e6 Merge pull request #3391 from akohlmey/refactor-find-xxx
Continued refactoring of internal APIs and their use
2022-08-17 19:37:20 -04:00
d1e0af7ef5 discuss why one would want to use check = no during minimization 2022-08-17 16:00:00 -04:00
daa6b78c43 update documentation 2022-08-17 15:22:59 -04:00
6aa1d1fb95 Edited compute reduce and reduce/chunk to make easier to parse and more consistent 2022-08-16 23:26:13 -05:00
fe8a7a3799 Math replacements; code-block LAMMPS; clarity and parsing-friendly edits 2022-08-16 20:29:12 -05:00
953f63bb8f More math and code-block edits 2022-08-15 23:48:30 -05:00
b4cdf5ce23 Updates to fix code-block at top, math, and anything else I found 2022-08-15 20:17:36 -05:00
73bee3c53c add discussion of neighbor list settings during minimizations. minor tweaks 2022-08-12 14:47:08 -04:00
7f9e6ce16a Merge branch 'develop' into shake-with-minimize 2022-08-11 13:21:08 -04:00
2b16a8d1c6 document how to update code that uses Output::find_dump() 2022-08-11 02:19:18 -04:00
e592f0f139 clarify the function of -nonbuf a bit more 2022-08-10 07:03:57 -04:00
5c589dbe20 add -nonbuf / -nb command line flag to disable buffering for screen and logfile 2022-08-09 15:52:47 -04:00
fb2dd26d45 Merge pull request #3383 from hammondkd/doc-fixes
Documentation fixes
2022-08-08 14:51:38 -04:00
3ca8df388d fix a couple of typos 2022-08-06 23:01:35 -04:00
0f68aa80fe fix typo 2022-08-06 21:44:56 -04:00
4ac74a4153 add is_os() special function to the variable command 2022-08-06 21:44:03 -04:00
322dc9a4de incorporate bugfixes and some suggestions from PR #3314 2022-08-06 17:43:40 -04:00
92c1f3e20a fixed rogue linebreak 2022-08-05 23:36:01 -05:00
485b3e7885 Resolve conflicts with devel branch 2022-08-05 23:30:41 -05:00
5734cce9d8 Updates documentation files to make them more consistent and some typo fixes (round 1) 2022-08-05 23:03:09 -05:00
d58b81afe2 adjust location of local ref targets for recent sphinx versions 2022-08-05 22:08:33 -04:00
4421a793d9 update API for variable argument logmesg() function 2022-08-05 21:56:47 -04:00
49df4d93a0 need new CSS hack to hide duplicate headers derived from the navigation bar 2022-08-05 21:44:31 -04:00
dce72e7007 Merge branch 'develop' into shake-with-minimize 2022-08-05 18:13:22 -04:00
b5c69e520d Merge pull request #3382 from akohlmey/coverity-fixes
Small updates and bugfixes from static code analysis
2022-08-05 17:55:13 -04:00
5b24e3aa3c Merge pull request #3379 from akohlmey/fix_store_global_peratom
Split internal fix STORE command into fix STORE/GLOBAL and fix STORE/PERATOM
2022-08-05 17:22:48 -04:00
ca1d646b25 offset is not used (by construction of the potential) 2022-08-05 07:20:44 -04:00
681ad88f08 rename fix STORE_LOCAL to STORE/LOCAL for consistency 2022-08-05 02:57:38 -04:00
083a662a5c small rewrite 2022-08-04 13:06:30 -04:00
53f49a160f add missinng portions of a couple doc pages 2022-08-04 08:49:38 -06:00
63fc9fcc62 document how to update source code for the fix STORE split 2022-08-04 06:43:41 -04:00
883a25bbd8 Merge pull request #3375 from akohlmey/next_patch_release
Step version strings for the next patch release
2022-08-03 17:49:36 -04:00
94c1aa8c5a tweak dipole doc page 2022-08-03 13:34:41 -06:00
7a5fa964b4 Merge pull request #3370 from lammps/doc-pair-dipole
Edits to pair dipole doc page
2022-08-03 12:47:08 -04:00
1eaa807bbf clarification on what constituets single, double, and triple quotes. 2022-08-03 01:50:11 -04:00