Commit Graph

21505 Commits

Author SHA1 Message Date
08db64c27f More updates for oxidation, more doc pages 2024-03-31 21:40:34 -06:00
7ea0dc3996 Adding more oxidation features + doc pages 2024-03-29 19:00:14 -06:00
010a4c076b Prototyping oxidation 2024-03-28 11:31:21 -06:00
b3de75da97 Cleaning up math, fixing tension bug, patching bond creation 2024-02-23 13:26:28 -07:00
70ea1dd352 Refreshing no shift flag for solid particles 2024-01-23 14:58:31 -07:00
574ccc64eb Fixing bugs for solid particles 2024-01-23 14:04:10 -07:00
affb879037 Merge branch 'develop' into rheo 2024-01-18 14:52:15 -07:00
af60285a3f Merge pull request #4048 from akohlmey/lepton_updates
Update LEPTON styles for more flexibility
2024-01-18 16:34:38 -05:00
0ad1d29c4d Merge pull request #4047 from stanmoore1/kk_fix_exchange_bug
Fix bug in some Kokkos fixes' unpack exchange on device
2024-01-18 14:58:09 -05:00
fe1b568241 Merge pull request #4046 from akohlmey/molecule-dipole
Add support for Dipoles section to molecule files
2024-01-18 14:57:01 -05:00
bf9b8606ef Merge pull request #3905 from jrgissing/bond_react_fixes_aug23
Assorted bond/react fixes
2024-01-18 14:41:01 -05:00
3b3ab4207b Merge pull request #4042 from akohlmey/fmtlib-10.2.1
Update embedded fmtlib code to version 10.2.1
2024-01-18 14:33:28 -05:00
73194764e9 add optional keywords "auto_offset" and "no_offset" to bond/angle style lepton 2024-01-18 11:05:52 -05:00
f3c5002634 Merge branch 'lammps:develop' into bond_react_fixes_aug23 2024-01-18 10:00:00 -05:00
57db9be64f add support for Lepton expressions with constant force or constant potential 2024-01-18 09:46:23 -05:00
189b08b4a5 Fix bug in some Kokkos fixes' unpack exchange on device 2024-01-17 14:47:59 -07:00
6e2df52c8f remove dead code and align better with LAMMPS programming style 2024-01-17 16:09:16 -05:00
16d4811592 move fix bond/history back to src folder 2024-01-17 15:48:03 -05:00
d5da47cf33 Revert "adjust a few more fix styles for fix bond/history being optional"
This reverts commit 497c48bd80.
2024-01-17 15:47:11 -05:00
b47ad7acf4 Revert "make delete_bonds command code compatible with BPM package not being installed"
This reverts commit 715b030bd6.
2024-01-17 15:46:03 -05:00
ff0d18114e silence compiler warnings 2024-01-17 13:25:46 -05:00
9312ce0beb store and print title line of molecule 2024-01-16 12:20:02 -05:00
87297902a3 Add support for "Dipoles" section in molecule file 2024-01-16 12:04:00 -05:00
e3f81a2513 correct typo 2024-01-16 04:11:56 -05:00
e82ba61183 loop over all neighbor lists for created bonds same as for broken bonds 2024-01-16 04:02:38 -05:00
67f06097ee Updating utils functions for pair rheo/react 2024-01-15 22:04:26 -07:00
a34ddd7ccd Merge branch 'rheo' of github.com:jtclemm/lammps into rheo 2024-01-15 17:26:42 -07:00
56764f0244 Merge branch 'develop' into rheo 2024-01-15 17:26:23 -07:00
74656f4e04 silence compiler warnings 2024-01-15 12:27:05 -05:00
4d830f1450 Merge branch 'develop' into collected-small-changes 2024-01-15 09:23:35 -05:00
07876b5d1a this limitation no longer applies 2024-01-14 07:53:33 -05:00
3c40f9fda2 remove obsolete machine makefiles 2024-01-13 10:23:58 -05:00
3668c0fc1b Merge branch 'develop' into fmtlib-10.2.1 2024-01-13 05:06:52 -05:00
497c48bd80 adjust a few more fix styles for fix bond/history being optional 2024-01-13 04:50:28 -05:00
2ac37aa91a Merge branch 'rheo' of github.com:jtclemm/lammps into rheo 2024-01-12 17:00:37 -07:00
a0cf5191c2 Adding nonzero starting rhos 2024-01-12 17:00:12 -07:00
39579d21c8 correct factor 2 force error for m=1 in angle style cosine/periodic 2024-01-12 18:45:10 -05:00
715b030bd6 make delete_bonds command code compatible with BPM package not being installed 2024-01-12 16:26:43 -05:00
a131b90962 make delete_bonds command code compatible with BPM package not being installed 2024-01-12 16:19:11 -05:00
faef34a8d4 Merge branch 'develop' into rheo 2024-01-12 13:26:38 -07:00
01a3656eaf correct factor 2 force error for m=1 in angle style cosine/periodic 2024-01-12 15:25:42 -05:00
72ba7f6535 whitespace/clang-format 2024-01-12 15:25:42 -05:00
7c744f170e improve error message 2024-01-12 15:25:41 -05:00
02d2509e68 Merge branch 'develop' into bigint_dof_computation 2024-01-12 15:25:09 -05:00
df5461c27e Merge pull request #4021 from jtclemm/BPM
Bug fixes for BPM package
2024-01-12 15:24:24 -05:00
92481b546e Merge pull request #4036 from akohlmey/collected-kokkos-changes
Collected small KOKKOS changes
2024-01-12 15:12:56 -05:00
dd7ce5fbaa remove one more source of 32-bit integer overflow 2024-01-12 14:57:26 -05:00
073a72d933 fixing merge conflicts 2024-01-12 11:12:02 -07:00
5ef8e8cf9a remove variables that are set but not used 2024-01-11 18:53:14 -05:00
d4bd385f5e remove unused function parameters and corresponding variables 2024-01-11 18:52:47 -05:00