Commit Graph

23817 Commits

Author SHA1 Message Date
a04c8c8a3b fix typo 2020-10-16 22:46:20 -04:00
cd605d46bc Add missing code-block language 2020-10-16 18:22:29 -04:00
b3b650acf2 Update Python_execute.rst 2020-10-16 18:22:29 -04:00
91a1e9abb4 Correct table in Python_examples.rst 2020-10-16 18:22:28 -04:00
4534e78df1 Add extra space in Python_run.rst 2020-10-16 17:20:38 -04:00
853b5ea576 Remove redundant links and wording 2020-10-16 17:13:31 -04:00
7420b7018a Merge pull request #2427 from akohlmey/lammps-shell-tweaks
A few more tweaks for the LAMMPS Shell
2020-10-16 16:43:42 -04:00
4d31ae7279 Beter system folder detection, add URL to "help" commmand. avoid buffer overflow. 2020-10-16 15:17:57 -04:00
eaa75417f2 Merge pull request #2425 from akohlmey/more-doc-updates
More updates/reorganization of the programmer part of the manual
2020-10-16 15:02:21 -04:00
4335f3d2ab Add LAMMPS icon in docs 2020-10-16 12:18:25 -04:00
f547cb4262 clarify tasks for single() for Bond and Angle classes 2020-10-16 10:48:00 -04:00
f2ba37e35d try swithing the current working directory when dropped into a Windows system folder. 2020-10-16 10:47:23 -04:00
f5c457334a make headers more compact 2020-10-16 02:43:20 -04:00
dd7a3a3a54 move the entries about using the Python module into its own (sub) toctree 2020-10-15 20:29:24 -04:00
08d892d0d9 whitespace 2020-10-15 19:56:31 -04:00
5d3f10611a Adjust Python deprecation notice 2020-10-15 18:25:58 -04:00
99f9a16a25 Update Python docs 2020-10-15 18:19:57 -04:00
4a946f5388 rename sections to User Guide and Programmer Guide 2020-10-15 12:00:36 -04:00
f15dc4a0a8 add more details and derived class to the class diagram and use a different layout engine 2020-10-15 12:00:10 -04:00
bc16709150 tweak 2020-10-14 23:59:06 -04:00
dc8e6bc5ab mention example using the new Fortran module in examples/COUPLE/simple 2020-10-14 23:29:03 -04:00
88644caaec update header texts 2020-10-14 23:28:28 -04:00
937f8b3f61 reorder sections in developer guide 2020-10-14 22:57:41 -04:00
d41cce7660 update LAMMPS class diagram 2020-10-14 22:57:21 -04:00
a7a4ea76a2 update LAMMPS logo with raytraced version 2020-10-14 22:57:02 -04:00
89842fc7c4 Merge pull request #2418 from akohlmey/collected-small-changes
Collected small changes and bugfixes for the stable release
2020-10-14 17:45:10 -04:00
28641bcbc7 Merge pull request #2402 from ndtrung81/gpu-dpd
Allowed dpd/tstat/gpu and dpd/gpu to work together in pair style hybrid
2020-10-14 17:18:02 -04:00
61c33e5622 update documentation conventions for recent changes to the manual. 2020-10-14 17:01:58 -04:00
3926cbe5f0 Merge branch 'patch-3' of github.com:evoyiatzis/lammps into collected-small-changes 2020-10-14 15:18:03 -04:00
865b159d16 update singularity definitions for readline 6/7 to have a pkg-config file 2020-10-14 15:06:57 -04:00
234f27514f avoid CMake failure when reporting packages without any of them enabled 2020-10-14 14:59:24 -04:00
65eb4b5527 explicitly enable C++11 and use pkg-config to get readline flags 2020-10-14 14:33:12 -04:00
d322e29f64 mention that C++11 also needs to be enabled with Ubuntu 16.04 2020-10-14 14:30:03 -04:00
45939602a5 Update fix_widom.rst
the shake keyword is not applicable to widom insertions
2020-10-14 20:17:35 +02:00
18091f15e0 Merge branch 'master' into collected-small-changes 2020-10-14 13:11:30 -04:00
7f804512b7 rename to be consistent with example log files 2020-10-14 13:11:13 -04:00
d27c7cd2fc Merge pull request #2421 from akohlmey/remove-obsolete-files
Remove outdated or obsolete files
2020-10-14 13:09:52 -04:00
60ff1380d7 update log files for bench/POTENTIALS 2020-10-14 11:04:51 -04:00
50986d5f27 Merge pull request #2416 from akohlmey/lammps-shell-improvements
Bug fixes and improvements for the LAMMPS Shell tool
2020-10-14 10:42:30 -04:00
1e2c8ce2e6 correct data file for USER-EFF 2020-10-14 08:15:59 -04:00
3894212712 correctly use REBO potential 2020-10-14 08:04:57 -04:00
bb6cfbeec1 mention AMD GPUs 2020-10-14 08:04:37 -04:00
a002194e26 remove outdated "bench/KEPLER" folder 2020-10-14 07:57:32 -04:00
07387d5e6c remove outdated "examples/accelerate" folder 2020-10-14 07:56:58 -04:00
587be7a21a Remove makefiles for obsolete machines and configurations or that are redundant 2020-10-14 07:54:07 -04:00
89d60afb91 make certain alpha_final is initialized 2020-10-14 04:51:51 -04:00
00e1edfae9 add a preset for selecting gcc compilers (for cases where they are not the default) 2020-10-14 04:51:34 -04:00
2026636f72 overview description for the unit test folders 2020-10-13 22:00:10 -04:00
acbb54d35f tweak testing and add at test run for history expansion 2020-10-13 21:32:48 -04:00
f003a6c536 implement a test prototype for the LAMMPS shell 2020-10-13 20:36:24 -04:00