Commit Graph

6774 Commits

Author SHA1 Message Date
9ea5e40255 move developer's guide tex sources back to src/Developer 2019-11-14 12:35:50 -05:00
62b3e79022 Add autodoc for lammps.lammps and lammps.NeighList 2019-11-13 15:54:22 -05:00
f18cb83def fix spelling: dihedras -> dihedrals 2019-11-14 01:07:30 +09:00
28269c4a21 change wording to be more in line with LAMMPS terminology and current state of implementation 2019-11-13 22:19:34 +09:00
85e96bf31c fix broken italization 2019-11-13 22:02:10 +09:00
b80e5d3d11 fix spelling: forth -> fourth 2019-11-13 18:45:49 +09:00
25e2a7a37f update bond style table docs about out-of-range errors 2019-11-12 14:25:45 -05:00
2d75e6b167 Add author name to false positives for citation "Boone, Babaei, Wilmer, J Chem Theory Comput, 15, 5579–5587 (2019)." 2019-11-12 23:37:14 +09:00
b6930cbc8d Add author names to false positives for citation "Surblys, Matsubara, Kikugawa, Ohara, Phys Rev E, 99, 051301(R) (2019)." 2019-11-12 23:34:03 +09:00
b65a3e94a7 update compute heat/flux documentation 2019-11-12 22:43:52 +09:00
de7a8c6559 Merge pull request #1768 from ellio167/doc-conda
Add Install_conda doc
2019-11-11 17:11:22 -05:00
0018a88f45 Only keep RST version of compute_gyration_shape_chunk 2019-11-11 15:32:48 -05:00
22a033f5d4 Move compute_gyration_shape_chunk.txt into txt/ folder 2019-11-11 15:32:09 -05:00
16f67ee56a Add new words to false-positives.txt 2019-11-11 15:26:48 -05:00
5ba7686939 add documentation about centroid/stress/atom compute 2019-11-12 01:40:59 +09:00
02791e0b4d Add Install_conda doc 2019-11-10 17:49:15 -06:00
b9648884bb Add rst versions of new documentation 2019-11-08 15:28:12 -05:00
07a34382ae Magic
Merge branch 'master' into shape_chunk
2019-11-08 15:25:47 -05:00
90729ebe25 Merge pull request #1764 from jwood13/stable
Add a max and min option to fix_gcmc
2019-11-08 15:01:51 -05:00
0583fb6ae0 update rst file also 2019-11-08 09:46:49 -07:00
82ecce8a1a Merge branch 'master' into compute-hma-doc 2019-11-08 09:40:40 -07:00
02a1ef0630 add compute hma to list of computes 2019-11-08 09:25:08 -07:00
6eebc86735 Update lammps.book
Update stochastic wall
2019-11-08 11:12:31 +01:00
01faaadf37 Update fix.txt
Add wall/reflect/stochastic
2019-11-08 11:08:05 +01:00
6aea69104c Update fixes.txt 2019-11-08 11:03:45 +01:00
b8a51b34a1 Rename fix_wall_stochastic.txt to fix_wall_reflect_stochastic.txt 2019-11-08 11:02:42 +01:00
4c48700df0 Update Commands_fix.txt 2019-11-08 11:01:50 +01:00
01f605a195 Update fix_wall_stochastic.txt 2019-11-08 10:58:41 +01:00
81e92de838 Fix doc Makefile 2019-11-07 21:47:29 -05:00
83f0eb0058 Remove unnecessary files 2019-11-07 21:47:02 -05:00
ce6893e717 Add max/min changes to documentation
again
2019-11-08 12:59:39 +11:00
e926c16544 Merge remote-tracking branch 'upstream/master' into stable 2019-11-08 12:58:23 +11:00
a2eec80f25 add max and min to documentation 2019-11-08 10:53:53 +11:00
d2da55f5e3 Update Howto_pylammps.rst and remove Howto_pylammps.txt 2019-11-06 23:52:04 -05:00
3f10c4fcdc Update Manual_build.rst and remove Manual_build.txt 2019-11-06 23:33:14 -05:00
eaef8089a1 Add LAMMPSLexer for LAMMPS code-blocks in docs 2019-11-06 17:40:39 -05:00
9ac9ba6401 Merge branch 'master' into doc_updates 2019-11-06 11:35:35 -05:00
2fd9a27902 update kim_commands.rst from .txt file 2019-11-06 08:33:05 -05:00
729eabd771 make QUIP_LIBRARY setting consistent and backport change to .rst file only 2019-11-06 08:32:07 -05:00
efcf919ede Merge branch 'master' into feature_parameterupdate 2019-11-06 08:21:33 -05:00
c3e52c3c8c Use globs for style lists 2019-11-05 15:49:09 -05:00
c756e472ae Remove Manual.txt and use variable for version 2019-11-05 15:34:57 -05:00
5e6694f3bc Re-enabled conversion of equations arrays. Disabled works even worse 2019-11-05 15:27:21 -05:00
423a3bb99f Add initial version of updated tools from #1533 2019-11-05 15:27:21 -05:00
74dade3ccb Change doc folder src -> txt, rst -> src 2019-11-05 15:27:21 -05:00
7ec1dccbe0 wrong cmake option for QUIP
QUIP cmake option for specifying library path should be QUIP_LIBRARY not QUIP_LIBRARIES
2019-11-05 14:57:44 +01:00
12cb19090a Remove txt2html and htmldoc from doc build 2019-11-02 23:07:49 -04:00
8f946b765e Add missing RST files 2019-11-02 23:03:36 -04:00
eac5f6e53e Update RST files 2019-11-02 23:01:18 -04:00
aeaa289d1d Merge branch 'master' into docs_to_rst_migration 2019-11-02 22:57:43 -04:00