Commit Graph

22697 Commits

Author SHA1 Message Date
e2b113b5e1 Merge branch 'master' into refactor-reading 2020-08-10 12:25:16 -04:00
6f1055a9b1 Merge pull request #2281 from jtclemm/patch_fix_store
Patch fix store to encode the size of per-atom data consistently with other related fixes for restarting.
2020-08-10 12:09:08 -04:00
e3beec8b95 revert permission change and replace 'b/c' with 'because' 2020-08-10 11:37:52 -04:00
0025140902 flag which table - identified by keyword - has a warning 2020-08-10 11:09:10 -04:00
869b09a78f fix typo 2020-08-10 11:08:30 -04:00
b92eda8ab8 enable testing with r-RESPA for real 2020-08-09 17:36:15 -04:00
c3903efb46 add test for berendsen barostat 2020-08-09 16:45:21 -04:00
4b7356f5af add support for testing virial contributions from fixes (as an option) 2020-08-09 16:39:31 -04:00
f1da1ed180 document restart capability of fix temp/csld and fix temp/csvr 2020-08-09 15:29:12 -04:00
e51bec10a8 one more test variant for fix setforce 2020-08-09 15:18:28 -04:00
4708cd7e1f always call MPI_Finalize() before exiting tester program 2020-08-09 15:17:53 -04:00
b223ca1436 cleanup and bugfix 2020-08-09 15:12:38 -04:00
2fcd7b79ab make certain that internal data in RanMars is initialized to avoid false positive with valgrind 2020-08-09 15:12:10 -04:00
f1da2b2f5f add tests for fix/csvr and fix/csld 2020-08-09 14:56:43 -04:00
bbcae3b20c added restart capability to fix temp/csld and fix temp/csvr 2020-08-09 14:56:27 -04:00
383bb7f905 added restart capability to RanMars 2020-08-09 14:56:00 -04:00
897ae681d3 remove dead code 2020-08-09 14:55:35 -04:00
548e108695 simplify 2020-08-09 14:55:11 -04:00
6e9bf8709e add tests for fix rattle 2020-08-09 13:58:10 -04:00
d8cd12b285 print warning only on MPI rank 0 2020-08-09 13:57:04 -04:00
3ebd194090 update documentation for unit testing to include timestepping fix tests 2020-08-09 08:18:35 -04:00
cabb166041 add tests for fix shake 2020-08-09 07:40:24 -04:00
a4eea29d90 add fix setforce test with variables 2020-08-09 07:32:46 -04:00
a6cc775241 add example for wall fix 2020-08-09 07:25:27 -04:00
1989279442 no need to list all dependencies. if atom style full is available, the rest is, too. 2020-08-09 07:25:15 -04:00
2053776118 increase code coverage 2020-08-09 07:13:26 -04:00
d7c1162e9d make plain and omp test consistent 2020-08-09 07:12:56 -04:00
a27a03bc1a now also test for global scalars and vectors and t_target for thermostats 2020-08-09 01:48:12 -04:00
b1e9b6d3fc set variable for checking thermostat target temperature 2020-08-09 01:33:37 -04:00
88f89c8f14 correctly read entire vector 2020-08-09 01:27:56 -04:00
62a501ebda store cumulative energy change in restart file 2020-08-09 01:27:14 -04:00
e94d1c5537 add function to query whether ErrorStats class has data 2020-08-09 01:01:35 -04:00
2edad432ce add support for storing a global scalar and global vector 2020-08-09 00:03:43 -04:00
4b5bc8f63b some more fix tests 2020-08-08 23:14:16 -04:00
6276e72509 also check fix styles. properly detect upper case. 2020-08-08 23:13:57 -04:00
511944d9bd add a first set of tests for timestepping fixes 2020-08-08 22:54:58 -04:00
faac18ffd2 add tester tool for timestep related fixes: integrators, thermostats, force manipulations, constraints 2020-08-08 22:54:17 -04:00
0ce43efc34 reorder folders, so that the fast tests are run first 2020-08-08 22:52:41 -04:00
6cea5a9aef added missing restart_settings() in morse/soft 2020-08-08 17:11:25 -04:00
9bbd6099af unit tests for /soft pair styles 2020-08-08 16:30:27 -04:00
f69dd734b2 update format 2020-08-08 14:48:11 -04:00
d0720794a6 Replaced mistakenly dropped line 2020-08-08 09:24:37 -06:00
41904f7946 Added cautionary comments 2020-08-08 09:15:56 -06:00
2775b93789 Merge pull request #2282 from akohlmey/more-unit-tests
Add more unit tests for pair and kspace styles
2020-08-07 19:06:44 -04:00
54b933164f tweak epsilon 2020-08-07 18:34:39 -04:00
7aae5ba5d1 set molecule ids for testing interlayer potentials 2020-08-07 18:34:25 -04:00
17b7476217 avoid sqrt computation on cutoffs. make single functions consistent with compute 2020-08-07 18:34:10 -04:00
9f469623c0 add test for lj/smooth/linear and gaus/cut 2020-08-07 18:13:58 -04:00
e169a5c785 add tests for pair style coul/streitz 2020-08-07 18:06:57 -04:00
a17633bd20 use open_potential in pair style coul/streitz 2020-08-07 18:06:43 -04:00