Commit Graph

189 Commits

Author SHA1 Message Date
17f39d9d2c rename fix STORE/PERATOM to STORE/ATOM 2023-03-13 22:33:47 -04:00
3815c0ef76 modify fix STORE/PERATOM and callers to allow ghost comm 2023-03-13 17:00:54 -06:00
3e053adfbe Print warning about unsorted custom dumps without atom IDs. Explain in manual. 2023-01-05 22:44:32 -05:00
b4118c51cc merged in current master 2022-11-04 08:22:18 -06:00
2132b1d904 update developer reference text 2022-10-24 11:08:26 -04:00
cccf3f6f78 change email for contacting LAMMPS developers, add to homepage checker 2022-10-20 20:36:03 -04:00
e2df4ed2a7 Merge branch 'develop' into distributed-grids
# Conflicts:
#	doc/src/Developer_utils.rst
#	doc/src/dump.rst
#	doc/src/fix_ave_chunk.rst
#	src/utils.h
2022-09-12 18:31:29 -04:00
7bba3c516f avoid excess string copy in auto loops 2022-09-01 16:02:32 -04:00
ccf6c2d55a Merge remote-tracking branch 'github/develop' into distributed-grids 2022-08-18 15:18:27 -04:00
da3e723351 Merge branch 'develop' into distributed-grids 2022-08-18 15:10:44 -04:00
301d379db8 Merge branch 'develop' into refactor-find-xxx 2022-08-16 18:05:33 -04:00
0cac041ad4 avoid segfault when using a custom format with too many format specifiers 2022-08-16 18:03:07 -04:00
3292ee8299 Fixed the last change to modify_params function 2022-08-14 10:21:49 +08:00
58800b5191 enable relancing to work with distributed grids 2022-08-11 13:28:50 -06:00
6c32058728 adapt all users of FixStore to use FixStoreGlobal or FixStorePeratom 2022-08-04 11:33:14 -04:00
69d9c5187e refactor group access, enable and apply clang-format 2022-04-15 15:29:43 -04:00
74f2b67b1a no if statement required before delete[] 2022-04-10 19:55:24 -04:00
200b4f13c7 use dynamic cast instead of c-style cast when casting from base type to derived class 2022-04-10 18:18:06 -04:00
dff3bc5656 Merge branch 'develop' into avoid-bigint-format-scanf 2022-04-08 17:39:25 -04:00
fb9316701b port colname changes to MPIIO package 2022-04-01 14:57:41 -04:00
ce67cb0ca1 first stab at implementing dump_modify colname 2022-04-01 07:41:13 -04:00
c4729b39b4 replace more uses of XXXINT_FORMAT with fmtlib 2022-03-30 13:53:25 -04:00
8fe7b928a7 use newer APIs to get access to fixes and computes 2022-03-18 13:16:18 -04:00
6145ef9cd2 fix bugs related to custom per-atom properties in dump style custom 2021-10-17 10:57:16 -04:00
53e773e438 calling fwrite() with a null pointer causes undefined behavior. avoid it. 2021-09-25 10:18:55 -04:00
bca99f684f update list and order of include files from include-what-you-use analysis 2021-09-18 14:16:48 -04:00
72193bf877 simplify/modernize 2021-09-16 00:11:44 -04:00
1a81a94dfb fix up whitespace issues (remove tabs, trailing whitespace) 2021-08-20 15:00:19 -04:00
9470a0eeb6 clarified doc pages for fix property/atom and read_data 2021-08-19 11:34:25 -06:00
1c67561be8 Merge branch 'fix-property-array' of github.com:lammps/lammps into fix-property-array 2021-08-19 09:00:51 -06:00
d9f3745eff pretty 2021-08-18 20:26:01 -04:00
5e6079c2fc Merge branch 'fix-property-array' of github.com:lammps/lammps into fix-property-array 2021-08-18 16:54:02 -06:00
cf25a586bd debugging merged version 2021-08-18 13:07:49 -06:00
e08c4abb4b whitespace fixes 2021-08-18 13:06:00 -04:00
2bf9fa91db more changes to merge with current master 2021-08-17 14:03:58 -06:00
e6af1eecb8 resolved merge conflicts with master 2021-08-17 11:55:33 -06:00
68c15ebf04 refactor/simplify code due to changes in Modify 2021-08-07 10:09:06 -04:00
3c0a2345cc simplify, reformat, and better error messages 2021-07-18 16:42:43 -04:00
09c19a936b update URLs in source code and manual 2021-05-24 14:18:20 -04:00
d1941392d3 disable clang-format for all existing .cpp files (for now) 2021-05-05 23:53:38 -04:00
8a49bf3a31 fix missing argument bug in velocity code and simplify a second case 2021-04-23 18:47:02 -04:00
8541b0da3e reduce compiler warnings by avoiding to redeclare variables so they shadow others 2021-04-23 15:35:45 -04:00
1f50557b38 Adopt utils::strdup in dump styles 2021-03-19 15:34:43 -04:00
5d4614b626 Correct vformat for bigint in dump_custom.cpp 2021-03-19 14:10:20 -04:00
dbf7b9c24a simplify and get rid of strtok() 2021-03-15 11:28:25 -04:00
9fa1688f39 small corrections for dump custom 2021-02-03 21:06:04 -05:00
2f7d6672df more files with ArgInfo support added 2021-02-03 16:39:01 -05:00
c2c8c5e493 Merge remote-tracking branch 'github/master' into arg-info-class
# Conflicts:
#	src/compute_chunk_atom.cpp
#	src/compute_chunk_spread_atom.cpp
#	src/compute_reduce.cpp
#	src/compute_reduce_region.cpp
#	src/compute_slice.cpp
#	src/fix_ave_atom.cpp
2021-02-02 11:33:01 -05:00
55da46f3e3 add ArgInfo support to some dump styles 2021-02-01 10:12:03 -05:00
3b9f3d989e IDs are immutable strings 2021-02-01 09:08:07 -05:00