Commit Graph

1718 Commits

Author SHA1 Message Date
012003c68a Merge branch 'master' into pair_rann
# Conflicts:
#	cmake/CMakeLists.txt
#	cmake/presets/all_off.cmake
#	cmake/presets/all_on.cmake
2021-05-26 15:17:30 -04:00
9e1db61b41 Merge branch 'master' into pair-style-nnp 2021-05-25 16:44:55 -04:00
2e6a0112d3 update URLs in some more files 2021-05-24 16:19:37 -04:00
63ecb77303 fix some more URLs 2021-05-24 15:38:27 -04:00
61b1126c3d Merge branch 'master' into pair_rann
# Conflicts:
#	cmake/CMakeLists.txt
#	src/Makefile
2021-05-24 12:21:04 -04:00
10961b8cb6 update to upstream 2021-05-21 16:15:31 -04:00
fb3fdb43a1 Tweak ASPHERE examples 2021-05-17 10:27:57 -06:00
640a46ec3f Fix broken examples 2021-05-17 08:29:54 -06:00
31a55f1f76 Merge branch 'master' of github.com:lammps/lammps into pair-style-nnp 2021-05-16 22:54:29 +02:00
aa6c6169a8 Merge branch 'master' into prepare-clang-format
# Conflicts:
#	src/KOKKOS/nbin_kokkos.h
#	src/KOKKOS/nbin_ssa_kokkos.h
#	src/MOLECULE/bond_fene_expand.h
#	src/USER-DPD/nbin_ssa.h
#	src/USER-DPD/nstencil_half_bin_2d_ssa.h
#	src/USER-DPD/nstencil_half_bin_3d_ssa.h
#	src/USER-INTEL/nbin_intel.h
#	src/USER-MISC/fix_propel_self.cpp
#	src/USER-OMP/npair_full_multi_old_omp.h
#	src/USER-OMP/npair_half_multi_old_newton_omp.h
#	src/USER-OMP/npair_half_size_multi_newtoff_omp.h
#	src/USER-OMP/npair_halffull_newtoff_omp.h
#	src/USER-OMP/npair_halffull_newton_omp.h
#	src/USER-OMP/npair_skip_omp.h
#	src/main.cpp
#	src/nbin_standard.h
#	src/npair_full_multi_old.h
#	src/npair_halffull_newtoff.h
#	src/npair_halffull_newton.h
#	src/npair_skip.h
#	src/npair_skip_respa.h
#	src/npair_skip_size.h
#	src/npair_skip_size_off2on.h
#	src/npair_skip_size_off2on_oneside.h
#	src/nstencil_full_bin_2d.h
#	src/nstencil_full_bin_3d.h
#	src/nstencil_full_ghost_bin_2d.h
#	src/nstencil_full_ghost_bin_3d.h
#	src/nstencil_full_multi_2d.h
#	src/nstencil_full_multi_3d.h
#	src/nstencil_full_multi_old_2d.h
#	src/nstencil_full_multi_old_3d.h
#	src/nstencil_half_bin_2d_newtoff.cpp
#	src/nstencil_half_bin_3d_newtoff.cpp
#	src/nstencil_half_bin_3d_newton_tri.h
#	src/nstencil_half_ghost_bin_2d_newtoff.cpp
#	src/nstencil_half_ghost_bin_2d_newtoff.h
#	src/nstencil_half_ghost_bin_3d_newtoff.cpp
#	src/nstencil_half_ghost_bin_3d_newtoff.h
#	src/nstencil_half_multi_2d.h
#	src/nstencil_half_multi_2d_newtoff.h
#	src/nstencil_half_multi_2d_newton_tri.h
#	src/nstencil_half_multi_2d_tri.h
#	src/nstencil_half_multi_3d_newtoff.h
#	src/nstencil_half_multi_3d_newton_tri.h
2021-05-14 15:24:02 -04:00
f121ae98d6 forget to update 2021-05-13 11:34:58 -04:00
53397fdda5 Expand MDI examples README 2021-05-12 18:31:10 -04:00
64fa70f8d2 Add USER-MDI README file 2021-05-12 18:31:10 -04:00
a731c43000 Add docs for mdi_engine command and fix 2021-05-12 18:31:10 -04:00
2854ea29a5 Add additional MDI examples 2021-05-12 18:31:10 -04:00
4a0b71f66b Add MDI example 2021-05-12 18:31:10 -04:00
e960674cea Merge pull request #2536 from jtclemm/multi_epcc
Add faster method for multi neighboring
2021-05-12 15:25:28 -04:00
8617770592 Merge pull request #2511 from samueljmcameron/fix_bd_sphere
Add USER-BROWNIAN package
2021-05-12 13:51:42 -04:00
1d10147cb6 reformat and shorten new example inputs 2021-05-12 07:53:18 -04:00
986a72ff6e remove executable permissions on non-executable files 2021-05-12 06:32:58 -04:00
f0e52981f2 Merge branch 'master' into multi_epcc 2021-05-12 06:16:52 -04:00
824dff8181 update .clang-format file from src and update files 2021-05-11 22:48:06 -04:00
d8291eea7b Merge branch 'master' into prepare-clang-format
# Conflicts:
#	src/MOLECULE/bond_fene.h
#	src/MOLECULE/bond_fene_expand.h
2021-05-11 21:49:48 -04:00
57a2f21757 add/update USER-BROWNIAN example inputs and logs 2021-05-11 21:13:10 -04:00
92c5951d6c Update to latest changes from upstream 2021-05-11 17:49:03 -04:00
e1b2235d36 Update py_nve.py 2021-05-10 18:42:27 -04:00
147e561dca Update in.fix_python_invoke_neighlist example 2021-05-07 12:51:58 -04:00
49a7bb57de add clang-format support to plugin examples 2021-05-05 23:51:12 -04:00
f12f9166a5 Resolving merge conflicts, updating URLs 2021-05-05 11:19:44 -06:00
6f5881e151 Merge pull request #2710 from msvbd/dpd_extended
Generalized DPD pair styles: dpd/ext and dpd/ext/tstat
2021-04-30 13:26:16 -04:00
b88cdd6890 Corrected implementation of ellipsoidal dynamics, made ashared base class for the time-integrators, templated the time-integrators (and so reversed changes that this PR had previously made to random_mars src files), combined docs of all three integrators. 2021-04-30 16:30:04 +01:00
95285f9365 Merge branch 'master' of github.com:lammps/lammps into pair-style-nnp 2021-04-26 23:52:59 +02:00
49b540381c Merge branch 'master' into dpd_extended 2021-04-23 15:03:03 -04:00
b2bfb26161 Merge https://github.com/lammps/lammps into pair_rann 2021-04-23 10:35:35 -05:00
3ac2b36993 add link to Commands_pair.rst 2021-04-23 16:10:00 +02:00
2e63d126e3 change dir to MISC 2021-04-23 15:49:11 +02:00
ad02e9df69 Added example of SPCE hydration, LJ + q 2021-04-22 18:40:45 +02:00
56be6d8ec2 Merge branch 'master' of github.com:lammps/lammps into pair-style-nnp 2021-04-20 23:20:14 +02:00
58549fa10d Merge branch 'clean-master2' of github.com:julient31/lammps into STT2 2021-04-19 17:32:16 -06:00
f2096ded96 - improved design of test_problem
- cleaned up langevin/spin
- started doc for stt and hexaniso
2021-04-19 17:09:53 -06:00
668b74bc09 Merge branch 'master' into spin-kokkos 2021-04-16 17:08:38 -04:00
f115b8ba2f Merge branch 'master' into dpd_extended 2021-04-16 14:16:53 +02:00
9031c23080 add extended dpd (dpdext & dpdext_tstat) 2021-04-16 14:14:18 +02:00
75579fc100 take advantage of having the common Command base class to unify code paths 2021-04-14 07:05:00 -04:00
b53822da46 provide Command base class in command.h for deriving command styles from 2021-04-13 17:47:00 -04:00
9bc353e5bd Merge pull request #2585 from tc387/charge_regulation2
Add fix charge/regulation to MC package
2021-04-12 18:49:03 -04:00
455bb933c8 adding modifications for more than one fix langevin/spin in fix nve/spin 2021-04-12 16:18:22 -06:00
0ca9f2e8a0 Merge pull request #2699 from yury-lysogorskiy/feature/user-pace
USER-PACE pair_style integration into LAMMPS
2021-04-12 17:05:40 -04:00
e95cbf618b Merge branch 'master' into charge_regulation2 2021-04-12 09:55:15 -04:00
7d95943b7e increased bin size in example input file to avoid dangerous builds 2021-04-12 01:46:39 -05:00