Commit Graph

43821 Commits

Author SHA1 Message Date
3d13227287 convert compiler workaround from augmenting compiler flags to target_compile_definition() 2025-04-07 22:17:08 -04:00
647bc7538d programming style fix 2025-04-07 21:46:09 -04:00
fc3d295560 add missing entry to OpenMP reduction clause. 2025-04-07 21:29:53 -04:00
641d496d4b Refined keyword options 2025-04-07 17:36:48 -07:00
319e14c8e3 Update atom->quat in fix_rigid.cpp 2025-04-07 18:28:33 -04:00
dcb04032fb avoid memory leak on element names 2025-04-07 18:18:16 -04:00
99b484a0cc add Kokkos/OpenMP version of mliap unified test 2025-04-07 18:06:31 -04:00
c505bfbdfe make sure OpenMP has a sufficient number of threads allocated 2025-04-07 18:06:07 -04:00
8ea6c5c395 avoid memory leak for element names 2025-04-07 18:05:35 -04:00
6c337ba655 manage cutghost array for KOKKOS, if requested by pair style command 2025-04-07 18:00:56 -04:00
52ce35adbc make sure cutghost is initialized 2025-04-07 17:59:45 -04:00
bfd496bee7 plug memory leaks in pyx files 2025-04-07 17:59:12 -04:00
9a06ac9585 Merge branch 'develop' into fix-adapt-dihedral 2025-04-07 23:15:52 +02:00
499192a1b2 restore option to request neighbor lists with neighbors of ghosts 2025-04-07 16:27:16 -04:00
809d5b5b93 Fix typo in dihedral_charmm.cpp 2025-04-07 21:08:35 +02:00
7b0c5f3e04 Fix typo indihedral_charmmfsw.cpp 2025-04-07 21:07:52 +02:00
d012d13c19 fix typo in dihedral_quadratic.cpp 2025-04-07 20:52:55 +02:00
fe9915f307 disable support for neighbors of ghosts. see also bff980b56f 2025-04-07 14:37:35 -04:00
fdbae98345 Merge remote-tracking branch 'github/develop' into collected-small-fixes 2025-04-07 14:05:27 -04:00
6372178caa Merge pull request #4538 from bathmatt/mliap-coefs-bug
Fixed invalid ref of coeffs in pair style mliap/kk
2025-04-07 13:58:55 -04:00
4ce473a649 Merge branch 'lammps:develop' into fix-adapt-dihedral 2025-04-07 19:54:18 +02:00
ef875b5973 fixed whitespace 2025-04-07 14:16:49 +02:00
239eb64cbb modifications in fix adapt.cpp 2025-04-07 11:58:24 +02:00
2b38b6d1c0 extract() implementation for dihedral class2 2025-04-07 11:35:20 +02:00
e93709d34e extract() implementation for dihedral helix 2025-04-07 11:20:53 +02:00
7655a4cb84 extract() implementation for dihedral multi/harmonic 2025-04-07 09:30:44 +02:00
e956e5ccda extract() implementation for dihedral charmm and charmmfsw 2025-04-07 09:24:44 +02:00
55964c1233 extract() implementation for dihedral cosine squared restricted 2025-04-07 09:11:42 +02:00
27ac8c0ea1 extract() implementation for dihedral opls 2025-04-07 09:05:42 +02:00
477f78b28c Fixed invalid ref 2025-04-07 08:42:57 +02:00
7034e930fd update date 2025-04-06 15:03:39 -04:00
6267389801 must force OMP_NUM_THREADS=1 for all tests to pass 2025-04-06 11:30:41 -04:00
911b3eb811 cleanup format 2025-04-06 11:16:58 -04:00
2a1fb835ad must not allocate eatom and vatom when called from KOKKOS version (which sets copymode to 1) 2025-04-06 10:33:05 -04:00
d4bcd3b7eb plug memory leak in SO3 descriptor for pair style mliap/kk 2025-04-06 10:25:56 -04:00
cf3ffb9dfc simplify fingerprint to match more suppression cases 2025-04-06 10:25:31 -04:00
c6d2812d2d Revert "match documentation to return 0 when checking for size of columns on 1d arrays"
This reverts commit 6272acd9c6.
Which isn't needed
2025-04-06 07:51:52 -04:00
ac76176dd5 must set lj cutoff to avoid uninitialized data access 2025-04-06 07:29:35 -04:00
cdea2737c7 remove CMAKE_TUNE_FLAGS 2025-04-06 07:06:20 -04:00
da2bc03ae6 do explicit loop over nlocal to avoid out-of-bounds access with implicit loop 2025-04-06 06:21:39 -04:00
6272acd9c6 match documentation to return 0 when checking for size of columns on 1d arrays 2025-04-06 06:19:34 -04:00
6ab7d7d818 Made plot_forces executable 2025-04-06 10:37:54 +02:00
ece0df7f7e Small modification of Tools.rst to include plot_forces + typo 2025-04-06 10:37:23 +02:00
94e6022210 Changed --recompute option of plot_forces to -d for consistency 2025-04-06 10:34:28 +02:00
b357540e92 Added plot_forces description to README.md 2025-04-06 10:33:30 +02:00
f8757abe92 Moved plot_forces to the tools/tabulate/ folder 2025-04-06 10:31:29 +02:00
2eaf1e52f0 add even more suppressions and generalize some 2025-04-06 03:49:11 -04:00
860a3cbbd3 add suppressions for dlopen() and friends 2025-04-06 03:02:34 -04:00
8d5459393f Added the plot_forces file from previous PR 2025-04-05 23:32:36 +02:00
2939e7d509 Merge branch 'develop' of github.com:lammps/lammps into plot_forces_tool 2025-04-05 23:28:52 +02:00