Commit Graph

31284 Commits

Author SHA1 Message Date
c6fe7ed4f4 add _USE_MATH_DEFINES for windows compilation 2022-03-10 10:18:50 -05:00
0a1fa5e040 lb/fluid code cleanup for whitespace, unused vars, windows cmath 2022-03-10 09:53:44 -05:00
c9007501a2 remove cerr iostream reference from lb/fluid 2022-03-10 08:43:54 -05:00
43319120d0 fix qeq/dynamic and qeq/fire need half neighbor list not full 2022-03-10 06:30:10 -05:00
1bba1ca2ae fix logic bug 2022-03-10 05:44:31 -05:00
61f5bbd633 update logic to avoid stall with neighbor list statistic during final summary 2022-03-10 05:21:53 -05:00
06e7bd8144 follow KOKKOS' advice about CPU binding of threads 2022-03-10 01:18:15 -05:00
abd8a6ee15 remove incorrect comment 2022-03-10 01:17:44 -05:00
10f8a597c7 use proper header for access to Kokkos class. 2022-03-10 01:11:33 -05:00
837b8fb753 bugfix 2022-03-10 01:00:34 -05:00
86b686f159 correct handling of neighflag member variable in KOKKOS styles 2022-03-10 00:52:16 -05:00
799ab965d9 make neighbor list request flags protected and add selected friends 2022-03-09 23:25:26 -05:00
26c0b9cf87 move calculation of number of neighbors to Neighbor class
this allows reusing the code in the ImbalanceNeigh class
2022-03-09 23:18:28 -05:00
3ef02edb48 adapt KOKKOS package styles to use new neighbor list request API 2022-03-09 22:43:38 -05:00
9f44221ee3 update neighborlist requests for new API in KSPACE package 2022-03-09 21:20:18 -05:00
2e2bd37883 automatically enable intel neighbor list request property for intel pair styles 2022-03-09 21:19:19 -05:00
9b26726f51 change to clang-format for LATBOLTZ routines 2022-03-09 20:41:28 -05:00
9bbd1df57b another chunk of neighbor list request updates 2022-03-09 19:49:08 -05:00
c4b23bd7e5 programming style updates use newer/simpler APIs 2022-03-09 19:21:03 -05:00
888db4b0ef update examples to standard lammps conventions 2022-03-09 18:13:45 -05:00
e8547af049 update neighbor list requests and compute style lookups in machine learning packages 2022-03-09 06:49:07 -05:00
3bb7a247ac convert some more files to use the new neighbor list request API 2022-03-08 21:29:33 -05:00
cef5076c9a no need to have a multi-threaded neighbor list in fix peri/neigh
I builds just a single neighbor list during setup.
2022-03-08 18:23:46 -05:00
1db981c784 convert a few more styles to the new neighbor request API 2022-03-08 18:20:28 -05:00
3c3912aff2 add deprecated lb/fluid integrator fixes to fix_deprecated 2022-03-08 17:10:22 -05:00
16449c3d11 fix merge conflicts for new version of lb/fluid and minor updates from develop branch on virtual functions and removed fix styles 2022-03-08 16:38:32 -05:00
1249c713f0 Add transpose to neigh list 2022-03-08 14:28:06 -07:00
55f8bf9c51 adapt some more styles to use the new neighbor list request API 2022-03-08 15:27:37 -05:00
fd73d1376a Merge branch 'develop' into neigh-request-refactor 2022-03-08 13:04:32 -05:00
dfbeedfded convert more neighbor list requests to the new API 2022-03-08 12:39:05 -05:00
deb694745b update neighbor list requests with default settings 2022-03-08 06:34:27 -05:00
028c8b5d27 add default arguments for requests with default flags 2022-03-08 06:33:27 -05:00
1296d6d938 update neighbor list request developer notes 2022-03-08 06:32:48 -05:00
3b0a6ac840 add support for requesting SSA neighbor lists and update a few more styles 2022-03-08 06:17:13 -05:00
decdcd0b55 Revert "programming style updates"
This reverts commit 5242409ebd.
2022-03-08 06:15:11 -05:00
5242409ebd programming style updates 2022-03-08 05:17:18 -05:00
795f24c3ff honor NEWTON_ON/OFF request flags 2022-03-08 05:17:18 -05:00
369b8365bf update QEQ, ASPHERE, and KIM packages to use new neighbor list request API 2022-03-08 05:16:55 -05:00
1aa8b64283 convert GPU package styles to use new neighbor list request API 2022-03-08 04:37:46 -05:00
9742817ba3 Dihedrals analytical results of compute_born_matrix are still wrong but, in some low deformations cases, they are ok. This is a progress... 2022-03-08 10:16:30 +01:00
374917fb6f tweak platform tests for CPU time to avoid bogus failures on windows 2022-03-07 21:42:02 -05:00
c6b4c418e7 Merge pull request #3161 from athomps/gcmc-relax-mol-mpi-error
Relaxed the error check on molecule moves in parallel. Molecule excha…
2022-03-07 20:24:36 -05:00
02f6b4c6e8 whitespace 2022-03-07 19:36:07 -05:00
87613bb106 rename doc file to be more generic and match the examples folder 2022-03-07 15:34:00 -05:00
07059c1362 Merge branch 'develop' into collected-small-changes 2022-03-07 15:29:47 -05:00
b0dae52e2d Merge pull request #3165 from olavgal/compute_pressure_cartesian_and_spherical
Computes for local pressure tensor in Cartesian and spherical coordinates
2022-03-07 15:05:51 -05:00
6edfb49527 update .gitignore for recent additions 2022-03-07 14:37:01 -05:00
bfb9638e6c correct issue introduced by global pattern replacement 2022-03-07 14:19:29 -05:00
5206d81742 make class name consistent with file name and add backward compatibility 2022-03-07 14:09:43 -05:00
1f3a3bb80b missing updates 2022-03-07 13:51:16 -05:00