Commit Graph

31284 Commits

Author SHA1 Message Date
415476983d Merge branch 'develop' into cg-dna 2022-01-26 19:31:48 +00:00
9b6bb00d07 Added unit test for atom_style oxdna 2022-01-26 19:20:34 +00:00
d51017ff50 Merge pull request #3095 from akohlmey/collect-small-changes
Collected small changes and fixes
2022-01-26 12:04:44 -05:00
d861dbe8e0 Remove unused variable 2022-01-26 11:37:53 -05:00
71a373cadb reshuffle Body struct members and add dummy for better alignment 2022-01-26 10:46:19 -05:00
8ca1004c03 cosmetic. align with clang-format 2022-01-26 10:45:46 -05:00
120662c438 correct citation info 2022-01-26 10:45:30 -05:00
cdd23ac9c2 Merge pull request #3097 from stanmoore1/dump_balance
Add option to balance dump file output
2022-01-25 15:53:38 -05:00
3297ed7c5f Refactor some declarations in KOKKOS package
Adds C++11 template helpers to shrink larger declarations.
2022-01-25 14:29:00 -05:00
75a00f4d11 minor cleanup 2022-01-25 08:52:53 -07:00
64dbce26dc Cannot shrink buf 2022-01-25 08:45:13 -07:00
992b1cf582 label as update #3 2022-01-25 07:42:00 -05:00
1505f3de06 fix tag caching issue in INTEL package 2022-01-25 07:41:37 -05:00
35dbabd471 alternate fix for tag caching issue in INTEL package 2022-01-25 07:39:37 -05:00
0b693e729d Whitespace 2022-01-24 17:33:36 -07:00
c914fc6baf Small doc tweak 2022-01-24 16:33:11 -07:00
67af170929 Sorting is not required for balancing 2022-01-24 16:22:55 -07:00
cb9ba8c0a3 Simplify code 2022-01-24 16:05:27 -07:00
a80f7ed11f Add error message to header file 2022-01-24 15:32:20 -07:00
aeb25b5a37 Tweak docs 2022-01-24 15:28:40 -07:00
1d60e4c463 Add docs 2022-01-24 15:16:49 -07:00
16810b84eb Add option to balance dump file output 2022-01-24 14:35:27 -07:00
fc13c95c85 tweaks and bugs 2022-01-24 20:55:28 +01:00
86ee1f5a1f updated create_atoms.h/cpp with accumulated changes 2022-01-24 20:38:51 +01:00
f9a2006d73 reorder includes 2022-01-24 08:44:29 -05:00
88dadd0fff consistently refer to INTEL package in upper case 2022-01-23 21:12:22 -05:00
cd16556256 add missing break statements.
@GenieTim this bug may have tainted your results. you would always get the energy value for any of the dx, dy, dz keywords
2022-01-22 17:13:54 -05:00
81e7583a8d initialize pointers, use provided constant, reorder include statements 2022-01-22 17:07:12 -05:00
f814dc5ff9 add checks after reading data 2022-01-22 17:06:28 -05:00
458ae4e38a initialize pointers, remove unused class member 2022-01-22 17:06:13 -05:00
d854e58d00 add sanity check 2022-01-22 16:51:07 -05:00
c93fba5e2d make certain that offset is always initialized 2022-01-22 16:45:38 -05:00
5142934a26 update to modern matrix representation 2022-01-22 16:38:58 -05:00
900ff39403 make consistent 2022-01-22 16:33:44 -05:00
78ed631877 spelling 2022-01-22 16:30:03 -05:00
fa88dacd7b integrate into manual and build/source code system. apply conventions 2022-01-22 16:29:48 -05:00
5db5322902 move compute to its designated location 2022-01-22 16:24:07 -05:00
7aed8954a5 Add paragraphs in Modify_style.rst 2022-01-22 11:03:44 -05:00
ef2969dfbf use override keyword in plugin sources 2022-01-22 10:30:58 -05:00
79a9829e92 Apply override to remaining classes 2022-01-22 09:56:01 -05:00
3e3cd4c94d Added correct units for pressure, still getting wrong answer 2022-01-21 19:46:54 -07:00
3286fcb13a Added correct units for pressure, still getting wrong answer 2022-01-21 19:29:23 -07:00
c16caea13b Fixed bounds error 2022-01-21 19:17:12 -07:00
384b715d8c First pass at fix numdiff/stress 2022-01-21 18:53:06 -07:00
12d708b97c Apply override to more classes 2022-01-21 18:24:06 -05:00
44bc766060 Apply override to more classes 2022-01-21 16:58:32 -05:00
06beb28d7d Apply override to Pair classes 2022-01-21 16:13:49 -05:00
6506be9409 update programming style 2022-01-21 15:56:58 -05:00
ff3f762499 Apply override to Fix classes 2022-01-21 14:45:53 -05:00
f83271aa40 Apply override to Compute classes 2022-01-21 13:23:36 -05:00