Commit Graph

487 Commits

Author SHA1 Message Date
a1266a1a1e Fix compile error with copysign function 2018-10-10 14:19:23 -06:00
791024586e Merge pull request #1131 from ckadding/master
Add compute_pressure_cylinder to USER-MISC package
2018-10-09 18:40:02 +02:00
a549752764 reduce compiler warnings and some more whitespace adjustments 2018-10-02 15:18:15 -04:00
590ab1661e convert more system headers to c++ style 2018-10-02 15:17:11 -04:00
08b135ce6b Apply uniform LAMMPS formatting 2018-10-02 14:54:09 -04:00
a6ba55080f Use MathConst namespace 2018-10-02 14:33:49 -04:00
e3b80e734a remove trailing whitespace 2018-10-02 12:37:13 -04:00
ff7449b29a ensure, that we have no division by zero and add an upper limit for bins 2018-10-02 12:27:05 -04:00
13d3903e8d integrate compute pressure/cylinder into build and README 2018-10-02 11:56:29 -04:00
c7c0defa77 Insert a comma 2018-10-02 10:45:43 -04:00
ac658a17fc Update compute_pressure_cylinder.cpp 2018-10-02 10:34:08 -04:00
af5ac6bcdf Add NULL pointers to constructor init 2018-10-02 09:55:37 -04:00
89c0655809 Add input validation 2018-10-02 09:46:53 -04:00
3a0cfc1d57 Modifying headers 2018-10-02 09:32:26 -04:00
dba8f9c62b Merge pull request #1137 from dilkins/fast-forward-langevin
Fast-forward Langevin functionality included in USER-MISC package
2018-10-02 14:19:37 +02:00
d5e71e7099 enumeration of flip types 2018-10-02 10:41:55 +02:00
14251948f3 LAMMPS coding conventions 2018-10-02 10:18:40 +02:00
799ffc58d9 C++ system headers included and enumeration of flip_int used;documentation corrected 2018-10-01 17:13:56 +02:00
21c59d4cf0 Fast-forward Langevin functionality included 2018-09-28 12:46:11 +02:00
918030bf1c Merge branch 'master' of https://github.com/oywg11/lammps into ilp-update 2018-09-24 10:29:08 -04:00
5aeba421bb Add compute_pressure_cylinder .cpp and .h files 2018-09-20 09:15:43 -04:00
e9ed95c2db Merge pull request #1108 from akohlmey/fix-sprintf-buffer-overflows
Avoid more buffer overflows due to using snprintf() on fixed size buffers
2018-09-18 16:57:10 -04:00
0c287a55cd Merge pull request #1092 from RomainVermorel/master
New stress/mop and stress/mop/profile computes for USER-MISC
2018-09-17 05:16:42 -04:00
7054800932 Merge branch 'master' into master 2018-09-12 22:13:43 +03:00
83b6d6ae96 small modifications of potential #839 2018-09-12 17:47:16 +03:00
1f5885fc45 Merge pull request #1099 from jrgissing/bond/react-efficient-competing_reactions
bond/react: efficient competing reactions
2018-09-11 21:18:41 -04:00
b915716b60 fix inconsistency resulting from error in auto-replace macro 2018-09-06 12:27:10 -04:00
9c27548a5c more replacing of sprintf() with snprintf() 2018-09-06 10:45:48 -04:00
5003354fba Replaced a tab with whitespace. 2018-09-05 11:42:48 -04:00
779f1bd0b1 Fixes a bug in pair_morse_smooth_linear where the cutoff was not properly initialized. 2018-09-05 11:27:10 -04:00
0c92c22755 moved contents of USER-MOP package to USER-MISC as suggested by @sjplimp 2018-09-05 10:56:12 -04:00
ae7b18fb77 only one call to extract needed 2018-09-05 00:11:50 -06:00
efd81a2854 Merge branch 'master' into bond/react-efficient-competing_reactions 2018-09-04 22:34:04 -06:00
a5f7b418de bond/react: efficient competing reactions 2018-09-04 22:06:49 -06:00
40e7ea83a3 Merge pull request #1084 from rbberger/cmake-and-warning-suppression-bugs
Fixes various compilation issues
2018-08-29 07:49:52 -06:00
ed61ed5b56 Merge pull request #1082 from jrgissing/bond/react-competing-reactions
Bond/react: treatment of simultaneous competing reactions
2018-08-29 07:49:25 -06:00
71bc72ec13 formatting: add additional space to avoid bad syntax highlights 2018-08-27 22:13:43 -04:00
41fff2979e Merge pull request #1077 from dschwen/warnings_1076
Fix compile warnings when building with pedantic flags
2018-08-27 17:14:34 -06:00
b05aa62c49 correctly exclude atoms from simultaneous competing reactions 2018-08-25 15:46:48 -06:00
38a998c03c Fix misc. warnings (#1076) 2018-08-24 14:58:28 -06:00
92a4dc25b1 Fix unused params in packages (#1076) 2018-08-24 10:42:08 -06:00
4b2629d8ba recompile/recompute/reinit -> re-compile/re-compute/re-init 2018-08-22 22:18:16 -04:00
2baa0b3452 nasty little bug 2018-08-22 03:32:17 -06:00
fd0b041e0e remove debugging comments 2018-08-21 21:10:34 -06:00
95d462e5d3 bond/react: better template validity check
now always throws error if a bond type changes, but both of of the involved atoms are too close to edge of template
2018-08-21 02:28:53 -06:00
f3615e83e8 move pair style eam/cd from USER-MISC to MANYBODY and update docs accordingly 2018-07-31 09:18:37 +02:00
6900f9edf9 Merge branch 'master' into collected-small-changes 2018-06-29 14:59:02 -04:00
75a3968039 multiple small tweaks to compute entropy/atom
- improve error detection and messages
- avoid sigma/cutoff to be zero (and thus division by zero)
- move new/delete of temporary storage outside of loop
2018-06-29 06:48:11 -04:00
a3a2981cd2 remove unused class member 2018-06-29 01:22:35 -04:00
4f9c0456e6 eliminate variable length arrays from compute entropy/atom 2018-06-29 01:22:26 -04:00