Commit Graph

1052 Commits

Author SHA1 Message Date
3404920e98 Merge pull request #2342 from lammps/fix-property-array
Enable fix property/atom to create custom arrays
2021-08-19 17:33:55 -04:00
11b4ae641f add unit test for pair style coul/exclude 2021-08-19 05:46:12 -04:00
5c46c6d3a6 update unit test for per-atom arrays and vectors 2021-08-18 22:51:09 -04:00
300fee0437 add some more checks for typical string matches for references to fixes and alike 2021-08-18 12:59:56 -04:00
c50abed92b recover compilation 2021-08-18 12:59:31 -04:00
0906e94207 small fixes 2021-08-17 16:13:01 -04:00
05bd545cd3 flush tiny stresses to zero to avoid false positives when testing 2021-08-17 15:10:46 -04:00
4f9941e18d support metal2real unit conversion in pair style drip 2021-08-17 15:05:23 -04:00
8b8cce4399 add unit test YAML file for DRIP pair style 2021-08-17 14:12:50 -04:00
82871ca515 Merge branch 'master' into interlayer-refactor 2021-08-17 13:25:13 -04:00
18cc43a560 extend ArgInfo class to also accept "i2_name" and "d2_name" 2021-08-17 12:04:58 -04:00
0dbcb5dd66 replace #define with constrexpr for better compiler error reports on integer constants 2021-08-17 09:42:08 -04:00
f24054f7b3 test utils::fgets_trunc() with buffer size of exactly the length of string 2021-08-17 09:41:19 -04:00
7b873ffc0b add unit tests for ilp/graphene/hbn and kolmogorov/crespi/full 2021-08-15 19:07:57 -04:00
e9e6cdca1d using GPU package is not compatible with fix qeq variants 2021-08-06 14:22:48 -04:00
7068f3e77b add a few more test cases for testing utils::split_words() 2021-08-04 12:02:55 -04:00
75214f1eeb Merge pull request #2857 from akohlmey/update-formatted-output
Modernize formatted output and string handling in packages
2021-07-30 12:50:25 -04:00
d211bbc0d6 expand ArgInfo class unit tests 2021-07-29 20:58:02 -04:00
6b20da7549 update lammps shell test to use a fix that is always available 2021-07-29 17:48:35 -04:00
3a968b81ad update 2021-07-29 13:59:59 -04:00
43b3c97cc0 add unit tests for scafacos kspace solver (skipping p3m) 2021-07-29 13:57:02 -04:00
600471d07f skip run test with fix when fix is not available 2021-07-28 12:11:54 -04:00
74a27c102e correct prerequisite 2021-07-28 12:11:35 -04:00
3ff096e517 Merge pull request #2848 from akohlmey/collected-small-changes
Collected small changes for the next patch release
2021-07-27 14:24:12 -04:00
8838fbc1c3 Merge pull request #2850 from akohlmey/lammps-gather-bonds
Implement lammps_gather_bonds() into the C-library interface and the Python module
2021-07-27 11:30:19 -04:00
2d488bab6b Merge branch 'master' into collected-small-changes 2021-07-27 11:15:00 -04:00
458253b452 add python interface with optional numpy support for lammps_gather_bonds()
unit tests are included
2021-07-26 22:40:21 -04:00
cc87e7eee3 add unit test for c-library interface function lammps_gather_bonds() 2021-07-26 20:59:14 -04:00
add7565d9f recover unit test compilation 2021-07-23 18:24:40 -04:00
c587252894 rename unittest YAML files 2021-07-23 12:13:50 -04:00
25aa202976 tweak epsilon to pass reaxff unittests on macOS 2021-07-23 12:12:57 -04:00
594bf56ee3 silence compiler warnings on macOS 2021-07-23 12:12:40 -04:00
ff7f2e78a1 Merge branch 'master' into fix-external-python-support 2021-07-22 23:09:54 -04:00
c8cc5ecb9f implement setting per-atom virial from numpy array (thanks to stackoverflow) 2021-07-22 22:50:05 -04:00
bf8bde5b03 implement numpy wrapper for setting per-atom energy. virial not yet implemented 2021-07-22 16:59:04 -04:00
324ae3181b python interface for per-atom data for fix external 2021-07-22 15:27:51 -04:00
5b46e679c8 update style names 2021-07-21 22:00:43 -04:00
5436975fa2 update unit test reference data for REAXFF also with OpenMP enabled 2021-07-21 16:01:28 -04:00
f6e9c30818 update unit tests 2021-07-21 00:47:10 -04:00
cf3bf374fa Merge branch 'master' into refactor-reaxff-parser 2021-07-21 00:30:53 -04:00
03f6244fef add quip SW potential file and corresponding unit test 2021-07-20 19:34:06 -04:00
1c4e8aba12 add tests for per-atom values, global energy with pf/array mode 2021-07-19 00:29:27 -04:00
f251bc544f support setting global virial for fix external from python 2021-07-17 07:38:53 -04:00
fa654f2270 add support for set_vector for fix external in c-library, python and unittest 2021-07-16 23:41:25 -04:00
5912d0a1c2 add support for setting global energy for fix external to python module 2021-07-16 17:43:44 -04:00
f3dc13c9dd expand library interface for fix external functionality 2021-07-16 17:29:15 -04:00
88e363c0bb document and add unit tests for lammps_set_fix_external_callback() 2021-07-16 14:51:04 -04:00
5f302b9035 temporarily skip testing REAXFF with OpenMP 2021-07-14 17:42:46 -04:00
d412a4c933 re-enable OpenMP testing for ReaxFF 2021-07-12 21:03:10 -04:00
757e2f8cff Merge branch 'master' into refactor-reaxff-parser
# Conflicts:
#	doc/src/fix_qeq_reax.rst
#	src/OPENMP/reaxc_bond_orders_omp.h
#	src/OPENMP/reaxc_bonds_omp.h
#	src/OPENMP/reaxc_forces_omp.h
#	src/OPENMP/reaxc_hydrogen_bonds_omp.h
#	src/OPENMP/reaxc_init_md_omp.cpp
#	src/OPENMP/reaxc_init_md_omp.h
#	src/OPENMP/reaxc_multi_body_omp.h
#	src/OPENMP/reaxc_nonbonded_omp.h
#	src/OPENMP/reaxc_torsion_angles_omp.h
#	src/OPENMP/reaxc_valence_angles_omp.h
#	src/OPENMP/reaxff_omp.h
#	src/Purge.list
#	src/QEQ/fix_qeq.cpp
#	src/QEQ/fix_qeq.h
#	src/QEQ/fix_qeq_dynamic.cpp
#	src/QEQ/fix_qeq_fire.cpp
#	src/REAXFF/fix_qeq_reax.cpp
#	src/REAXFF/reaxc_allocate.h
#	src/REAXFF/reaxc_bond_orders.h
#	src/REAXFF/reaxc_bonds.h
#	src/REAXFF/reaxc_control.h
#	src/REAXFF/reaxc_defs.h
#	src/REAXFF/reaxc_ffield.h
#	src/REAXFF/reaxc_forces.h
#	src/REAXFF/reaxc_hydrogen_bonds.h
#	src/REAXFF/reaxc_init_md.cpp
#	src/REAXFF/reaxc_init_md.h
#	src/REAXFF/reaxc_io_tools.cpp
#	src/REAXFF/reaxc_io_tools.h
#	src/REAXFF/reaxc_list.h
#	src/REAXFF/reaxc_lookup.h
#	src/REAXFF/reaxc_multi_body.h
#	src/REAXFF/reaxc_nonbonded.h
#	src/REAXFF/reaxc_reset_tools.h
#	src/REAXFF/reaxc_system_props.cpp
#	src/REAXFF/reaxc_system_props.h
#	src/REAXFF/reaxc_tool_box.h
#	src/REAXFF/reaxc_torsion_angles.h
#	src/REAXFF/reaxc_traj.cpp
#	src/REAXFF/reaxc_traj.h
#	src/REAXFF/reaxc_types.h
#	src/REAXFF/reaxc_valence_angles.h
#	src/REAXFF/reaxc_vector.cpp
#	src/REAXFF/reaxc_vector.h
#	src/REAXFF/reaxff_api.h
#	src/REAXFF/reaxff_defs.h
#	src/REAXFF/reaxff_inline.h
#	src/REAXFF/reaxff_types.h
#	src/text_file_reader.cpp
#	src/text_file_reader.h
#	unittest/force-styles/tests/atomic-pair-reax_c.yaml
#	unittest/force-styles/tests/atomic-pair-reax_c_lgvdw.yaml
#	unittest/force-styles/tests/atomic-pair-yukawa_colloid.yaml
2021-07-12 14:25:47 -04:00