Commit Graph

11987 Commits

Author SHA1 Message Date
367dd4635b Merge remote-tracking branch 'github/develop' into qeqr 2025-03-29 18:41:36 -04:00
fc9d7bc181 rename fix qeqr/reaxff to fix qeq/rel/reaxff 2025-03-29 18:40:47 -04:00
285baf27b5 Merge pull request #4518 from akohlmey/file-formats
Add a general description of common file formats in LAMMPS
2025-03-29 16:30:31 -04:00
7ff9ee51e5 small tweaks 2025-03-29 15:56:34 -04:00
990007c87b whitespace, rewrap, and comments 2025-03-28 23:55:38 -04:00
4dbf18e2c9 small suggested changes 2025-03-28 23:15:33 -04:00
1172a8c6c8 Merge pull request #4506 from fxcoudert/mac
Update macOS info
2025-03-28 18:50:45 -04:00
9661c21052 comment out possible additional sections 2025-03-28 09:56:06 -04:00
738fb4a502 add info about restart files 2025-03-27 16:29:13 -04:00
2542b989ee small tweak 2025-03-26 19:59:52 -04:00
7f0b71f7c0 spelling 2025-03-26 17:36:27 -04:00
637b572600 Merge remote-tracking branch 'github/develop' into file-formats 2025-03-26 17:33:00 -04:00
dcbc3c9dbc whitespace 2025-03-26 09:52:19 -04:00
194b3408f7 add section about molecule files 2025-03-26 09:51:09 -04:00
bc1b22a2f8 finish (for now) the summary of the data file format 2025-03-26 09:01:07 -04:00
d515af2e2b Merge branch 'develop' into library-handle-argument-errors 2025-03-26 05:13:10 -04:00
d658c589f7 update formulations some more 2025-03-25 21:47:04 -04:00
faa6e806bf Merge remote-tracking branch 'github/develop' into file-formats 2025-03-25 17:53:02 -04:00
7878ec170c Merge pull request #4501 from lammps/errors-more-cleanup
[Community Project] More Error and Warning Messages Cleanup
2025-03-25 17:52:08 -04:00
bb788cb1a2 Merge remote-tracking branch 'github/develop' into file-formats 2025-03-25 17:36:55 -04:00
227b7840e7 add disclaimer and improve some formulations 2025-03-25 15:42:11 -04:00
2d0c1af656 Merge remote-tracking branch 'github/develop' into howto-bulk-to-slab 2025-03-25 15:40:55 -04:00
fecd93783b spelling 2025-03-25 15:40:40 -04:00
bafd2a8d6b Merge remote-tracking branch 'github/develop' into file-formats 2025-03-25 14:22:55 -04:00
5dbeacb1e8 Merge pull request #4508 from jewettaij/master
Fixed the Moltemplate HowTo docs
2025-03-25 13:02:31 -04:00
183486d813 implement suggestions from @ndtrung81 2025-03-25 11:27:19 -04:00
e9ac9e77db add option to return an entire column, row, or array as flat array with lammps_extract_fix() 2025-03-25 11:20:15 -04:00
15cdba0bf0 have Error::set_show_error() return the previous setting 2025-03-24 04:13:24 -04:00
3d5430bfe4 Merge branch 'develop' into errors-more-cleanup 2025-03-23 16:01:00 -04:00
88cecbd11d alternate implementation of jump to top by @rbberger 2025-03-22 18:54:49 -04:00
c65c8819e3 cosmetic changes and re-wrap paragraphs 2025-03-22 16:06:17 -04:00
f4b92a23ae small clarification cherry-picked from PR #4502 2025-03-22 15:47:52 -04:00
6f24e1edd5 remove leftover pieces of obsolete warning 2025-03-22 15:42:51 -04:00
12cc12b4f4 Typos and alternate wording suggestions 2025-03-22 12:57:28 -06:00
cb5e45ff1f small tweaks 2025-03-22 11:24:53 -04:00
8a0900f0ab revert broken change to print angstrom character 2025-03-22 11:20:37 -04:00
9d0c25fbab improve wording 2025-03-22 11:15:26 -04:00
c289ad9471 forgot to include upward arrow image 2025-03-22 06:08:48 -04:00
725b34a70a add snapshot images to show the initial and final geometry and box 2025-03-22 06:08:16 -04:00
410d3e84b0 add a Howto demonstrating how to convert a bulk molecular system to a slab 2025-03-22 04:41:34 -04:00
1b58a4695b add explanations for "before/after simulation box is defined" errors 2025-03-21 20:30:47 -04:00
649fd86e11 add errorurl(11) with explanation to "Energy/Stess was not tallied by pair style" 2025-03-21 19:57:57 -04:00
3834169c92 first attempt to implement a "jump to top" anchor in the sidebar 2025-03-21 19:30:28 -04:00
2e98ae9de9 Improve qtpie/reaxff docs and add qeqr/reaxff docs 2025-03-20 13:19:50 +00:00
ca575e395e fix spelling and duplicate references issues 2025-03-19 20:39:06 -04:00
04bb57f8e2 update a bunch more error messages 2025-03-19 17:17:47 -04:00
37248a011e deleted trailing whitespace in the Howto_moltemplate.rst file (for PR #4508) 2025-03-19 15:30:06 -04:00
63b8e86a4b tried to minimize the differences between my version and the existing version 2025-03-19 13:58:46 -04:00
6700a3bed1 Fixed the Moltemplate HowTo docs. (I also added a very simple polymer example.) This needed to be done because the file names and @atom types in the old version of this HowTo are no longer accurate. OPLSAA has changed. Now this HowTo is compatible with the latest version of OPLSAA. More importantly, after this update, the HowTo documentation should never need to be updated again because OPLSAA force field files are named according to the OPLSAA version/date. For example, the "oplsaa.lt" file has been renamed to "oplsaa2024.lt". Future OPLSAA updates will go in other files with different names. So the @atom types in this HowTo example should never need to be updated in the future, regardless what happens with OPLSAA. 2025-03-19 13:36:09 -04:00
db8abdb592 Update macOS info 2025-03-19 13:57:49 +01:00