Commit Graph

11175 Commits

Author SHA1 Message Date
be138d368e Merge branch 'master' into fix_numerical_differentiation 2020-03-04 19:11:39 -07:00
3eeb7547b5 step version string for next patch and stable version 2020-03-03 07:25:18 -05:00
0723bf3db7 setup issues with fix numdiff 2020-03-02 13:32:05 -07:00
0e58c1b299 fix issues with restoring box-shifted coords 2020-02-28 12:55:27 -07:00
aaed572b01 Merge branch 'fix_numerical_differentiation' of github.com:charlessievers/lammps into charlie 2020-02-28 12:53:28 -07:00
cdb4275ced fix issue with restoring box-shifted atom coords 2020-02-28 12:53:04 -07:00
fbee5966f6 added cstring back to includes 2020-02-27 14:42:31 -07:00
7a720ee9cf removed cstring from includes and fixed style warnings 2020-02-27 13:54:29 -07:00
d242051c8e Merge pull request #1898 from akohlmey/next_lammps_version
Update version info for next release candidate
2020-02-27 14:38:08 -05:00
10fa9aa074 added cstring to includes 2020-02-27 11:37:02 -07:00
35f4a62566 Change final displace atom to reset atom to save on memory and computation 2020-02-27 11:31:33 -07:00
6e7e365981 Merge pull request #1888 from lammps/release-preparation
Documentation and Build script and Info updates for stable release
2020-02-27 13:23:08 -05:00
236535f61b fixed include, fixed numdiff forces getting called before initialization 2020-02-27 10:48:46 -07:00
67bfda532f mods to fix numdiff 2020-02-27 09:52:23 -07:00
704207f3c8 Finalize Kokkos on error exit 2020-02-27 08:51:02 -07:00
2d2cb46dc0 move release date 2020-02-27 08:58:09 +01:00
7bd3215226 Merge pull request #1894 from stanmoore1/kk_snap_chunk
Make Kokkos pair SNAP chunksize variable user-settable
2020-02-26 15:27:37 -05:00
275626a1de re-enable perpertual neighborlist for compute entropy/atom if avg flag is used only 2020-02-26 13:57:11 -05:00
49b07a2360 Keep original chunksize value set by user in case atom count changes 2020-02-26 09:42:59 -07:00
a828facbd8 Merge pull request #1900 from akohlmey/couple-lammps-plugin
Example for loading LAMMPS as a plugin from a shared library
2020-02-26 10:40:24 -05:00
37e6fd1bae Merge pull request #1901 from stanmoore1/compea_neigh
Change compute entropy/atom to use occasional neigh list
2020-02-26 10:39:37 -05:00
dcb83d41af Merge pull request #1899 from agiliopadua/thole
Added safeguard to thole pair styles
2020-02-26 07:44:04 -05:00
e766518062 Merge pull request #1896 from pmla/user-ptm-group-fix
Apply compute group correctly for compute ptm/atom
2020-02-26 07:28:01 -05:00
f81b963a8a more strict argument checking and initializing output data to zero 2020-02-26 13:12:39 +01:00
526c9a548f need to set single_enable to 0 after single() was removed 2020-02-26 12:58:10 +01:00
91c31da576 remove trailing whitespace 2020-02-26 12:52:21 +01:00
49873f765c Added comment to credit myself 2020-02-25 16:53:04 -07:00
f18f2537e6 Updated error/warnings section 2020-02-25 16:35:54 -07:00
72891aacb2 Fixed groups not working 2020-02-25 16:23:35 -07:00
809d481fd1 Merge branch 'master' of https://github.com/charlessievers/lammps into fix_numerical_differentiation 2020-02-25 15:35:53 -07:00
13bff07606 Added documentation, added an example, avoided position round off, added in compute_pe's compute_scalar, now fix produces per-atom array instead of global array 2020-02-25 15:32:37 -07:00
e083f38c59 Merge pull request #1892 from sef43/master
temper timeout synchronization fix
2020-02-25 13:26:30 -05:00
4180b4a7d6 add example to COUPLE folder demonstrating loading LAMMPS as a plugin. 2020-02-25 19:07:49 +01:00
eb51511ddf Change compute entropy/atom to use occasional neigh list 2020-02-25 10:48:00 -07:00
7acba4584d added group2ID 2020-02-25 18:05:36 +01:00
00137765a8 Delete fix_propel_self.h 2020-02-25 17:17:13 +01:00
cdfb1d5026 Delete fix_propel_self.cpp 2020-02-25 17:16:59 +01:00
6956dc1a33 Added safeguard to thole pair styles 2020-02-25 16:50:49 +01:00
26f11f19a7 update LAMMPS version string 2020-02-25 15:04:56 +01:00
3168c1116f fixed group selection 2020-02-25 14:16:21 +01:00
bf62646977 add check for required atom properties to USER-SDPD 2020-02-25 14:08:55 +01:00
1b7a8d8875 Make Kokkos pair_snap chunksize user-settable 2020-02-24 12:53:01 -07:00
f1ad4ed66b update the internal timeout clock across replica when we stop parallel tempering 2020-02-23 05:09:25 -05:00
c3fc680ccd apply timeout bugfix to temper variants in USER-MISC 2020-02-23 05:04:21 -05:00
d226f5d02c cosmetic changes 2020-02-23 05:03:50 -05:00
35483a95cd temper timeout synchronization fix 2020-02-22 23:39:59 +00:00
95de4f38c9 Edit includes 2020-02-20 23:35:47 -07:00
f0cf7ba3c0 First draft of numerical difference fix 2020-02-20 23:15:53 -07:00
94d1aa45bb add "make mode=print <machine>" to print out compiler and linker flags and libs for any available makefile 2020-02-19 18:11:34 +01:00
960553db58 remove C++11 check for stable release 2020-02-17 15:09:24 -05:00