Commit Graph

1862 Commits

Author SHA1 Message Date
f206eab338 mv examples/gcmc to mc, add 2 scripts for fix mol/swap 2021-10-13 15:02:33 -06:00
74219585f3 Update log files 2021-10-13 14:03:50 -06:00
727a028a6f Add inputs with field 2021-10-13 13:08:08 -06:00
510987dc80 Merge branch 'master' into multi-config-support
# Conflicts:
#	cmake/Modules/Packages/MSCG.cmake
#	examples/plugins/CMakeLists.txt
2021-10-11 17:03:41 -04:00
1f4c50037b Merge branch 'master' into acks2_release 2021-10-11 16:13:20 -04:00
4fca127ea4 copy MSVC++ compiler hacks to plugin CMakeLists.txt file 2021-10-07 15:59:12 -04:00
4aae11f8fb port plugin loader to platform namespace 2021-10-06 08:59:56 -04:00
7801d112b3 enable building plugins for windows 2021-10-06 07:10:35 -04:00
359aa1d805 Merge branch 'master' into acks2_release 2021-09-30 00:26:25 -04:00
4d9cef823d must use a soft core potential to avoid a singularity 2021-09-24 16:22:44 -04:00
9063466c03 move ACKS2 force field file to potentials folder and add LAMMPS-style metadata 2021-09-21 14:37:37 -04:00
fe64649e49 Merge branch 'master' into multi-config-support 2021-09-20 20:42:03 -04:00
d79b1b3145 Tweak example and add reference logs 2021-09-20 13:01:57 -06:00
9feab449fb Add ACKS2 example 2021-09-20 12:23:19 -06:00
b4acacf5cb add minimal example and a unit test input 2021-09-14 16:40:42 -04:00
585f35235e add note to README files about age of the example 2021-09-11 13:31:55 -04:00
8cef98fae7 update example to use current library interface. No need to use the namespace. 2021-09-11 13:31:55 -04:00
bd225e2484 update example for dynamically loading LAMMPS with current library API 2021-09-11 13:31:55 -04:00
30558c0cd6 convert plugin compilation to also use add_subdirectory() instead of external project 2021-09-11 07:01:48 -04:00
90d95466c2 add UNITS: metadata 2021-08-27 23:21:04 -04:00
16d73c86ba adjust example TTM input scripts 2021-08-26 13:37:00 -06:00
62fcaedd33 update example log files 2021-08-26 13:25:46 -06:00
7b3e7d3d3a allow for command-line setting of initial temp 2021-08-26 11:52:07 -06:00
661ec1acc3 fix typo 2021-08-17 21:55:22 -04:00
01503535f4 remove unused symlinks 2021-08-17 10:48:09 -04:00
75214f1eeb Merge pull request #2857 from akohlmey/update-formatted-output
Modernize formatted output and string handling in packages
2021-07-30 12:50:25 -04:00
c49a533ad9 reformat, simplify, add reference log files 2021-07-29 15:40:43 -04:00
dcff3d70e0 simplify fix instance creation 2021-07-29 15:18:58 -04:00
b9ab0eb607 fix broken symbolic links 2021-07-28 21:32:52 -04:00
f192102da9 move examples away from USER-MISC now that the package folder is gone 2021-07-24 20:53:23 -04:00
d2684a2370 Merge branch 'master' into package-reorganization2 2021-07-23 07:41:10 -04:00
c78d4eab36 update standard examples for new style names 2021-07-21 22:52:43 -04:00
f8f4af471f general rename of files, styles, and keywords from "reax/c", "reax", or "reaxc" to "reaxff" 2021-07-21 21:52:25 -04:00
d16f751413 Merge branch 'master' into package-reorganization2 2021-07-21 10:23:04 -04:00
cf3bf374fa Merge branch 'master' into refactor-reaxff-parser 2021-07-21 00:30:53 -04:00
6604508b55 Merge branch 'master' into collected-small-changes 2021-07-20 19:39:10 -04:00
96389213ab Merge pull request #2788 from jtclemm/track-contacts
Track properties of pair interactions
2021-07-20 19:38:21 -04:00
8a4820a033 add data/units comments to example quip potential files 2021-07-20 19:31:52 -04:00
63794aa698 Merge branch 'master' into track-contacts
# Conflicts:
#	doc/src/Packages_details.rst
#	src/DIELECTRIC/pair_coul_cut_dielectric.h
#	src/MISC/fix_pair_tracker.cpp
#	src/MISC/fix_pair_tracker.h
#	src/MISC/pair_tracker.cpp
#	src/MISC/pair_tracker.h
#	src/pair_tracker.h
2021-07-20 16:19:38 -04:00
52156ccb35 Merge branch 'master' into package-reorganization2 2021-07-19 11:07:42 -04:00
15b3b6445e Updated tests and documentation, added warning message 2021-07-19 11:22:06 +01:00
b7a17dc25d Added warning message in documentation and dsDNA ring test in examples 2021-07-16 12:57:21 +01:00
741e13743c Merge branch 'master' into refactor-reaxff-parser 2021-07-15 17:23:56 -04:00
e99b8ed07c Merge branch 'master' into cg-dna 2021-07-15 13:37:24 +01:00
0f0059269d Modified data_bonds_post() and calling structure 2021-07-15 13:36:40 +01:00
757e2f8cff Merge branch 'master' into refactor-reaxff-parser
# Conflicts:
#	doc/src/fix_qeq_reax.rst
#	src/OPENMP/reaxc_bond_orders_omp.h
#	src/OPENMP/reaxc_bonds_omp.h
#	src/OPENMP/reaxc_forces_omp.h
#	src/OPENMP/reaxc_hydrogen_bonds_omp.h
#	src/OPENMP/reaxc_init_md_omp.cpp
#	src/OPENMP/reaxc_init_md_omp.h
#	src/OPENMP/reaxc_multi_body_omp.h
#	src/OPENMP/reaxc_nonbonded_omp.h
#	src/OPENMP/reaxc_torsion_angles_omp.h
#	src/OPENMP/reaxc_valence_angles_omp.h
#	src/OPENMP/reaxff_omp.h
#	src/Purge.list
#	src/QEQ/fix_qeq.cpp
#	src/QEQ/fix_qeq.h
#	src/QEQ/fix_qeq_dynamic.cpp
#	src/QEQ/fix_qeq_fire.cpp
#	src/REAXFF/fix_qeq_reax.cpp
#	src/REAXFF/reaxc_allocate.h
#	src/REAXFF/reaxc_bond_orders.h
#	src/REAXFF/reaxc_bonds.h
#	src/REAXFF/reaxc_control.h
#	src/REAXFF/reaxc_defs.h
#	src/REAXFF/reaxc_ffield.h
#	src/REAXFF/reaxc_forces.h
#	src/REAXFF/reaxc_hydrogen_bonds.h
#	src/REAXFF/reaxc_init_md.cpp
#	src/REAXFF/reaxc_init_md.h
#	src/REAXFF/reaxc_io_tools.cpp
#	src/REAXFF/reaxc_io_tools.h
#	src/REAXFF/reaxc_list.h
#	src/REAXFF/reaxc_lookup.h
#	src/REAXFF/reaxc_multi_body.h
#	src/REAXFF/reaxc_nonbonded.h
#	src/REAXFF/reaxc_reset_tools.h
#	src/REAXFF/reaxc_system_props.cpp
#	src/REAXFF/reaxc_system_props.h
#	src/REAXFF/reaxc_tool_box.h
#	src/REAXFF/reaxc_torsion_angles.h
#	src/REAXFF/reaxc_traj.cpp
#	src/REAXFF/reaxc_traj.h
#	src/REAXFF/reaxc_types.h
#	src/REAXFF/reaxc_valence_angles.h
#	src/REAXFF/reaxc_vector.cpp
#	src/REAXFF/reaxc_vector.h
#	src/REAXFF/reaxff_api.h
#	src/REAXFF/reaxff_defs.h
#	src/REAXFF/reaxff_inline.h
#	src/REAXFF/reaxff_types.h
#	src/text_file_reader.cpp
#	src/text_file_reader.h
#	unittest/force-styles/tests/atomic-pair-reax_c.yaml
#	unittest/force-styles/tests/atomic-pair-reax_c_lgvdw.yaml
#	unittest/force-styles/tests/atomic-pair-yukawa_colloid.yaml
2021-07-12 14:25:47 -04:00
0540ce547b Merge branch 'master' into package-reorganization2 2021-07-12 11:45:27 -04:00
41a434ae1f fix compilation issues with new/old Intel compilers 2021-07-11 14:09:17 -04:00
6571a84884 move some styles around 2021-07-09 16:54:00 -04:00
b2a396da3c Merge pull request #2828 from tomswinburne/snap-scale
Adding scale parameter to pair/snap for fix/adapt
2021-07-07 16:10:11 -04:00