Commit Graph

1862 Commits

Author SHA1 Message Date
4f3e693b4a Delete README 2020-11-05 12:50:41 -07:00
a04faff152 Merge branch 'master' of github.com:lammps/lammps 2020-11-05 10:03:06 -07:00
4435ed4870 bond/react:example for create_atoms feature
builds a polysytrene 50-mer in vacuum
2020-10-29 23:08:10 -04:00
bfb8f0f4c0 Merge branch 'clean-master2' of github.com:julient31/lammps into exchange-biquadratic 2020-10-27 09:41:19 -06:00
8976cf0230 Update data.spce
The masses were assigned wrongly in the data file (although they eventually get overwritten in the in.gcmc.h2o script)
2020-10-27 00:35:51 -04:00
a3c887accb update examples and include restart example, too. 2020-10-27 00:31:25 -04:00
d64bbb99bf add examples for demonstrating the use of atom style template 2020-10-26 23:10:45 -04:00
adf74b3a22 use https://lammps.sandia.gov based URLs consistently 2020-10-21 16:45:30 -04:00
2ed11f55d6 fix URLs to documentation files 2020-10-21 11:12:13 -04:00
0a30398d1f get rid of obsolete README note. We have long ago fixed the aliasing issue in Coulomb tabulation 2020-10-21 11:10:26 -04:00
5ac910a748 remove redundant file 2020-10-19 15:46:49 -04:00
2c54b7e505 update USER-SMD examples: rename files, shorten runs and add logfiles 2020-10-19 15:45:26 -04:00
f67d9bb523 Correct USER smd examples and remove tabs 2020-10-19 14:56:40 +02:00
dc8e6bc5ab mention example using the new Fortran module in examples/COUPLE/simple 2020-10-14 23:29:03 -04:00
07387d5e6c remove outdated "examples/accelerate" folder 2020-10-14 07:56:58 -04:00
7fdf70c960 Merge branch 'master' of github.com:lammps/lammps 2020-10-13 19:10:32 -06:00
414cf024cd Merge branch 'clean-master2' of github.com:julient31/lammps into exchange-biquadratic 2020-10-12 11:45:57 -06:00
73b2ad0acc - slight modifs of the damped exchange example 2020-10-12 11:38:52 -06:00
c85498e98b started to add spin/kk to the doc
modified validaion tests for kokkos compatibility
2020-10-09 09:47:47 -06:00
84c9fcf6e9 add legacy warning to F77 style Fortran wrapper 2020-10-09 11:15:15 -04:00
5457accb3d make the legacy fortran wrapper work (again) 2020-10-09 07:52:36 -04:00
ca3d10fa39 need to define LAMMPS_LIB_MPI 2020-10-09 07:37:25 -04:00
a581b4b85e Merge pull request #2412 from lammps/progguide-updates
Updates to the Programmer Guide part of the Manual
2020-10-08 21:50:37 -04:00
4995ab3264 Merge pull request #2403 from akohlmey/fortran2-updates
Update of fortran2 interface for recent changes in the C-library interface
2020-10-08 20:23:44 -04:00
4baf60ffd1 adding examples of the biquadratic pair_style and offset option 2020-10-05 20:47:07 -06:00
2d7494186c rerun all validations tests (modifed one) 2020-10-05 19:37:24 -06:00
2825abb028 Improved scripts validaton problems 2020-10-05 17:13:54 -06:00
02b10380bc Create ctypes only neighbor list API variant
This moves the lammps.get_neighlist() method to lammps.numpy.get_neighlist().
lammps.get_neighlist() now returns a NeighList object, while the NumPy variants
returns a NumPyNeighList object. The main difference between the two is that while
the ctypes variant returns neighlist elements as

atom idx (int), numneighs (int), neighbors (POINTER(c_int))

the NumPy variant returns

atom idx (int), neighbors (numpy.array)
2020-10-05 16:21:37 -04:00
121dc82f1b Merge branch 'clean-master2' of https://github.com/julient31/lammps into exchange-biquadratic 2020-10-02 10:57:38 -06:00
086a71ba46 incorporate LAMMPS fortran2 interface updates and apply a few corrections 2020-10-02 00:07:01 -04:00
2c7a686220 update fortran2 module 2020-10-01 23:20:52 -04:00
b1f6a6799c Merge remote-tracking branch 'github/master' into coul_tt 2020-09-28 13:56:00 -04:00
c217c8df24 shorten example and do not print CPU time output to avoid false positives when comparing 2020-09-28 13:49:08 -04:00
064f735272 source files updated, examples changes 2020-09-25 16:08:20 +02:00
0cc0d10092 Removing the electron_stopping_fit folder 2020-09-24 20:36:29 -06:00
1778c82307 Moved electron/stopping/fit information to the exisiting electron_stopping folder 2020-09-24 20:34:31 -06:00
60e237a39f Fixing text 2020-09-24 20:32:40 -06:00
9e520b63c6 Fixing text 2020-09-24 20:31:33 -06:00
88b0963cf8 Deleting files 2020-09-24 20:24:34 -06:00
0511bc38e0 Updated 2 species example to use an existing potential, and generated new log files for each case. 2020-09-24 20:22:10 -06:00
33bf8270a6 Editing system sizes and run times 2020-09-24 16:34:16 -06:00
a6e18eaf42 Deleting files 2020-09-24 16:23:25 -06:00
c997925584 Commented out dump commands in input files, edited in.cascade_SiSi to read from /potentials/SiC.tersoff.zbl, and deleted Si.tersoff.zbl file 2020-09-24 16:21:51 -06:00
808b8bf431 Merge branch 'master' of github.com:lammps/lammps 2020-09-24 16:12:50 -06:00
6675371d6b Removed elec_drag folder 2020-09-24 15:40:56 -06:00
02c1480546 update README in examples/COUPLE/simple 2020-09-24 02:17:11 -04:00
ac78f8f1e1 update examples/COUPLE/simple sources to work with the current version of LAMMPS 2020-09-24 01:30:34 -04:00
f5635208e3 Modified the fix_elec_drag.* name to fix_electron_stopping_fit.* to align with and distinguish from existing fix_electron_stopping.* 2020-09-23 17:14:14 -06:00
6392d24411 Added an electronic stopping fix (fix_elec_drag.*) to USER-MISC/, with corresponding examples in examples/USER/misc/ 2020-09-23 16:36:12 -06:00
2206de7c68 Examples added, bug fixed 2020-09-21 16:14:33 +02:00