Commit Graph

1289 Commits

Author SHA1 Message Date
e3a892ccd7 Start unittests for MPI load balancing 2021-03-04 10:10:58 -05:00
7b4034d07a reformat. compute/check some molecule properties 2021-03-02 23:05:27 -05:00
c44dbc567d tweak test for creating atoms and bond from a molecule file 2021-03-02 22:41:09 -05:00
6ab8de58bc add a few more tests 2021-03-02 22:26:40 -05:00
16631a0c18 add tests for one file with two molecules and two files with one each 2021-03-02 15:54:06 -05:00
e3942a0d48 update test to use stdio consistently 2021-03-02 12:53:15 -05:00
e4ce1de66b add "death tests" for no molecule file and molecule file w/o atoms 2021-03-02 12:16:12 -05:00
861ad834c6 fix typo 2021-03-02 11:22:43 -05:00
01a32b67b0 add minimal unit test program for molecule files 2021-03-02 11:07:03 -05:00
ca8b268ad5 new convencience function for checking valid IDs (includes unit tests) 2021-03-02 11:02:09 -05:00
299cc08232 Merge branch 'master' into gpu-unittest 2021-03-01 23:01:41 -05:00
cf5614e7d7 change precision handling so we can on the GPU also run with mixed and single precision 2021-03-01 22:44:24 -05:00
92dd89f9e6 skip a few more tests that crash with the GPU package (/w OpenCL) 2021-03-01 22:41:13 -05:00
7b49b39a93 fix typo 2021-03-01 22:28:23 -05:00
6c7de1cbd0 no support for pppm on GPU (yet) with nozforce or triclinic cell 2021-03-01 22:14:35 -05:00
e02ad44b8b GPU package does not support tabulated long-range coulomb 2021-03-01 22:05:47 -05:00
fb57d86364 dpd and dpd/tsat may only run with 1 thread due to use of per-thread pRNG 2021-03-01 21:45:36 -05:00
6fa3e6d23e remove hardcoded checks for incompatible styles. use skip_tests keyword instead 2021-03-01 21:44:41 -05:00
5629947d89 add skip test entries for tests failing to run for GPU or USER-INTEL 2021-03-01 21:43:38 -05:00
205b45423c combine repetitive code into convenience function 2021-03-01 20:07:19 -05:00
74713be4a2 add new key to YAML files: skip_tests 2021-03-01 19:27:11 -05:00
5407d2968a update unit test reference 2021-02-28 23:33:05 -05:00
e75f1f2f82 Merge branch 'master' into relres-update 2021-02-28 23:20:44 -05:00
30d15b9b22 test for extract parameters in unit tests 2021-02-28 11:59:17 -05:00
dfeee1f19b run neighbor list on CPU for hybrid pair styles 2021-02-27 15:42:32 -05:00
121774dde3 adjust epsilon for one test 2021-02-27 10:58:04 -05:00
a6f32e472d add explanation why we set pair_modify table only in the lammps_init() 2021-02-27 10:39:03 -05:00
f797d9cb2e must always set pair_modify table (and table/disp) explicitly for long-range styles 2021-02-27 10:36:38 -05:00
981ed01983 recreate all yaml files with updated timestamps 2021-02-26 23:16:51 -05:00
19311d408d use utils::trim() to remove extra whitespace from ctime() output. 2021-02-26 23:10:43 -05:00
fff215b48f Merge branch 'master' into gpu-unittest
# Conflicts:
#	unittest/force-styles/tests/mol-pair-born.yaml
#	unittest/force-styles/tests/mol-pair-born_coul_dsf.yaml
#	unittest/force-styles/tests/mol-pair-born_coul_long.yaml
#	unittest/force-styles/tests/mol-pair-born_coul_msm.yaml
#	unittest/force-styles/tests/mol-pair-born_coul_wolf.yaml
#	unittest/force-styles/tests/mol-pair-buck.yaml
#	unittest/force-styles/tests/mol-pair-buck_coul_long.yaml
#	unittest/force-styles/tests/mol-pair-buck_coul_msm.yaml
#	unittest/force-styles/tests/mol-pair-lj_cubic.yaml
#	unittest/force-styles/tests/mol-pair-morse.yaml
#	unittest/force-styles/tests/mol-pair-tip4p_cut.yaml
#	unittest/force-styles/tests/mol-pair-zbl.yaml
2021-02-26 22:47:11 -05:00
1521c7a370 Merge pull request #2625 from yafshar/kim_citation
Updating the kim citation report to lammps conventions
2021-02-26 20:38:28 -05:00
2ab9c34e52 Merge pull request #2631 from rbberger/python_additions
Add LAMMPS output readers to Python package
2021-02-26 20:27:52 -05:00
e88c124da6 add extra cases for query unit test 2021-02-26 12:47:43 -06:00
aea0ceac03 Merge pull request #2632 from akohlmey/utils-regex-update
Add new utils::strfind() function and update mini-regex code
2021-02-26 10:50:34 -05:00
cfc86f7a2d add unit tests for new utils::strfind() function 2021-02-25 23:05:48 -05:00
f92089298d Fix bug in AvgChunkReader and add docs 2021-02-25 16:56:19 -05:00
69245cb294 add unit tests for citeme class crc32 checks of unique citations 2021-02-25 15:52:38 -05:00
977ba9ff66 Add LogFile and AvgChunkFile readers
Implements changes proposed in #144
2021-02-25 15:32:53 -05:00
03559dfe21 add tests for dihedral and improper style hybrid 2021-02-24 20:51:05 -05:00
a0a865643e add missing coefficiencts to data file. no more need to set afterwards 2021-02-24 20:42:25 -05:00
2d1dcc95a6 update refrence data for impropers 2021-02-24 19:49:42 -05:00
a910c08b57 correct input 2021-02-24 19:39:14 -05:00
9fbec51ac6 update reference data 2021-02-24 19:34:39 -05:00
bd7c37d539 CHARMM dihedral styles require a matching pair style. add code for that. 2021-02-24 19:34:15 -05:00
cf9255a90d avoid problems testing dihedrals and impropers 2021-02-24 18:37:58 -05:00
d81ca27e96 align tester sources with current state of other testers 2021-02-24 17:31:09 -05:00
c45658f1c7 Merge branch 'master' into improper-tester 2021-02-24 17:08:34 -05:00
6ecbcc277b update death tests for removed commands 2021-02-23 09:59:24 -05:00
293ebad98f Merge branch 'master' into kim_commands 2021-02-23 09:34:32 -05:00