Commit Graph

1289 Commits

Author SHA1 Message Date
77d475d121 Add more tests 2020-09-11 15:48:23 -04:00
58833ce11e Add API tests 2020-09-11 15:21:36 -04:00
1855f92694 Use include and omit 2020-09-11 12:44:41 -04:00
377163d940 Add target to generate Python coverage XML 2020-09-11 11:36:22 -04:00
97000fa016 Merge remote-tracking branch 'origin/master' into python_interface_guide 2020-09-11 09:48:28 -04:00
e813e2d30a add minimal unit test for lammps_get_mpi_comm() API 2020-09-09 22:12:47 -04:00
e6d340aee1 Merge branch 'master' into gpu-unittest 2020-09-09 14:39:29 -04:00
f4c4c62349 adjust test to updated API 2020-09-09 09:27:34 -04:00
a3cc7581b1 rename test for memory pools 2020-09-08 15:12:08 -04:00
0ee7c5f434 add more MyPage test variants 2020-09-07 15:27:13 -04:00
ab5c81f7d6 refactor some more to reduce redundant code. 2020-09-07 08:57:37 -04:00
bbb81a8dd0 add unit tester for MyPage class 2020-09-07 08:33:05 -04:00
64728678f1 Merge branch 'python_interface_guide' of github.com:rbberger/lammps into python_interface_guide 2020-09-04 17:15:58 -04:00
96db122377 Add Python coverage collection if enabled 2020-09-04 17:15:51 -04:00
ceed9284c1 Merge branch 'master' into collected-small-changes 2020-09-04 13:32:47 -04:00
f19ce32bf5 a few more small tweaks 2020-09-04 09:42:11 -04:00
ce78be864a move date2num() convernience function from Universe class to utils namespace 2020-09-03 17:47:45 -04:00
12aa689e97 fix typo in cfg/zstd tester tool 2020-09-02 13:38:18 -04:00
c50a82af78 apply consistent naming scheme for tester source files and executables 2020-09-01 20:16:39 -04:00
2ffb5ddd5a add kspace dependency to coul/streitz/long test 2020-09-01 17:34:08 -04:00
31bd76efa5 Merge remote-tracking branch 'origin/master' into zstd_support 2020-09-01 12:58:41 -04:00
2effd2f707 Merge remote-tracking branch 'origin/master' into zstd_support 2020-08-31 15:38:56 -04:00
c5a2e50bf5 Add Zstd variants of dump local and xyz 2020-08-31 15:38:20 -04:00
443a817152 Add tests for dump local/gz and xyz/gz 2020-08-31 14:54:10 -04:00
99b83333c9 Add dump cfg/zstd 2020-08-31 14:20:52 -04:00
5faca3aef0 Add tests for dump cfg/gz 2020-08-31 13:36:42 -04:00
7fca3b7a65 revert accidental change 2020-08-31 12:46:22 -04:00
0c7b9a7c63 update utils tester for API change in bound()/boundsbig() 2020-08-31 11:43:25 -04:00
dd03c7232a Merge remote-tracking branch 'github/master' into move-convenience-functions 2020-08-31 11:41:18 -04:00
5a22f4d7f2 support that LAMMPS_POTENTIALS is a real path variable with multiple entries, not just a single folder 2020-08-29 22:22:03 -04:00
7413dc783e add tokenizer tests for splitting path environment variables 2020-08-29 22:07:22 -04:00
8601e608ca add unit tests for utils::bounds() and utils::boundsbig() 2020-08-29 22:00:07 -04:00
e44707d5e1 add unittest support for the fortran interface to LAMMPS 2020-08-28 20:56:52 -04:00
02ea7af1f7 let dummy tests pass 2020-08-28 18:49:39 -04:00
876c53a275 Merge pull request #2310 from lammps/library-refactor
LAMMPS C library interface and python module refactor
2020-08-28 18:40:16 -04:00
cb09844182 Add placeholders for future tests 2020-08-28 17:52:15 -04:00
6bcc263b41 Ensure LAMMPS pointer is of type c_void_p
Fixes segfaults caused by API change. The API change in
lammps_open and lammps_open_no_mpi makes them return the LAMMPS pointer
via their return value. However due to how ctypes operates, even
if restype is specified to be c_void_p, the function returns an integer.

Without the proper type of the pointer, calling functions without arglists would default
to using 32bit integers to pass an argument, which cuts away parts of the 64bit pointer.
Subsequently, resolving the truncated pointer in the library causes segfaults.

This commit fixes the root cause. But it also highlights the need of specifying
the arglists of all library functions.
2020-08-28 14:21:03 -04:00
167f12a4a4 Add python test for extract_compute of peratom vector 2020-08-28 13:53:36 -04:00
9b0c07f797 remove undesired trailing whitespace 2020-08-27 19:06:29 -04:00
b1b9fe8d24 Merge branch 'gpu-bugfix' into gpu-unittest 2020-08-27 19:01:02 -04:00
b1cca2cf74 update reference data for molecular test with pair style beck 2020-08-27 19:00:20 -04:00
d0cffd83af Merge branch 'gpu-bugfix' into gpu-unittest 2020-08-27 18:01:27 -04:00
d7e2be1c81 Start Python interface tests for numpy extensions 2020-08-27 17:47:49 -04:00
fa13e23f7a add atomic test for gauss pair style 2020-08-27 17:41:25 -04:00
fdb726629f revert "fix" for pair style beck/gpu and correct beck and beck/omp instead
we should consistently apply factor_lj for both, force and energy, or not
2020-08-27 17:14:05 -04:00
2f629db3d4 Refactor Zstd dump styles 2020-08-27 13:43:36 -04:00
ced78a72eb Add dump custom/zstd and tests 2020-08-26 19:59:28 -04:00
e9fd8b3ec6 Migrate changes to dump custom/gz and add tests 2020-08-26 19:44:55 -04:00
55829752c9 Merge branch 'master' into library-refactor 2020-08-26 19:08:09 -04:00
78a1b92503 Add dump atom zstd tests 2020-08-26 16:35:35 -04:00