Commit Graph

18496 Commits

Author SHA1 Message Date
3ab4be859c Merge branch 'master' into fix_gjf_bugs 2019-10-15 17:16:33 +02:00
e7d1d547a1 Merge pull request #1719 from akohlmey/pppm-tip4p-triclinic
Correct pppm/tip4p styles for triclinic boxes
2019-10-15 10:10:39 +02:00
37456733bf prefer local mpi.h file by using '#include "mpi.h"' instead of '#include <mpi.h>' 2019-10-15 09:28:34 +02:00
d53b882a5a Fixed vfull tally bug in KOKKOS 2019-10-14 19:28:20 -07:00
623e8078e3 Fixed vfull tally bug 2019-10-14 19:11:50 -07:00
a517cffd8f Corrected differing syntax in fix_langevin.cpp 2019-10-14 14:41:03 -07:00
9c5c33e869 Updated gjf examples 2019-10-14 14:39:45 -07:00
28c9255f99 don't include USER-PLUMED in "most" preset 2019-10-14 08:02:59 -04:00
25b114eeb4 avoid compilation failure without installed packages 2019-10-14 07:56:37 -04:00
be01cfffa3 fix typo and port find_M() code to USER-OMP version 2019-10-14 07:53:24 -04:00
94b80f9ac6 correct pppm/tip4p to give correct forces with tip4p with triclinic cells 2019-10-13 17:47:09 -04:00
8f431b0fb8 Merge pull request #1716 from akohlmey/topology-interaction-check
Add topology interaction check to Force::init()
2019-10-11 20:47:14 +02:00
cd0e408d90 Merge pull request #1714 from athomps/clebsch-gordan-check
Added invisible helper function to check values of Clebsch-Gordan coeffs
2019-10-11 20:45:50 +02:00
346b3c53ee Added comm->me check 2019-10-11 11:07:02 -06:00
29574eaa45 added "likewise" as suggested by @sjplimp 2019-10-11 17:19:47 +02:00
da56c7fc66 document freshly added warnings in header and manual 2019-10-11 16:47:35 +02:00
7bf2b99785 print warnings if force styles and topology data are inconsistent
print a warning if there are bonds/angles/dihedrals/impropers in the
bond topology, but no corresponding style defined.
print an additional warning when special bonds scaling factors
for this kind of interaction is not 1.0 and thus the neighbor list
for pair styles may be affected, too.
2019-10-11 16:18:02 +02:00
2b8f300ce8 Merge pull request #1713 from jrgissing/bond/react-angle-constraints
Bond/react: angle constraints bugfix
2019-10-11 14:48:56 +02:00
a1c49159a4 Added invisible helper function to check values of Clebsch-Gordan coefficients 2019-10-10 18:32:16 -06:00
4804acbb9b angle constraint bugfix 2019-10-09 21:17:39 -06:00
01f8071865 Merge pull request #56 from lammps/master
rebase
2019-10-09 21:08:55 -06:00
6e244bc8dc Merge pull request #1631 from jibril-b-coulibaly/patch-2
Bug fixes for pair style granular
2019-10-09 14:14:48 +02:00
0cf60d0c62 Merge pull request #1709 from lammps/units-example
New example/UNITS dir
2019-10-09 13:28:30 +02:00
f2840176b3 clarified the README 2019-10-08 18:14:32 -06:00
945f903683 added an examples/UNITS dir 2019-10-08 18:02:21 -06:00
e77e286d95 Merge pull request #1707 from charlessievers/lammps_gjf
Lammps gjf small updates
2019-10-08 23:06:36 +02:00
0e10fbb133 Merge pull request #1690 from charlessievers/third_order
Added third order, added documentation, took out extraneous lines, ad…
2019-10-08 21:57:15 +02:00
9b15f4e2dc Added the change to langevin gjf documentation 2019-10-08 12:47:30 -07:00
4f57332a89 Merge pull request #1706 from TOFarmer/create_bonds_improper
Add single/improper to create_bonds
2019-10-08 21:40:31 +02:00
23b21a82b5 Merge pull request #1699 from akohlmey/collected-small-changes
Collected small changes for next patch release
2019-10-08 21:39:55 +02:00
b13be8f953 Merge branch 'master' into lammps_gjf 2019-10-08 12:21:29 -07:00
bd269ac59c Merge branch 'master' of https://github.com/lammps/lammps 2019-10-08 12:16:59 -07:00
fe9f7f4d8d Merge pull request #1693 from stanmoore1/kk_snap_opt
Port more SNAP optimizations to the KOKKOS Package
2019-10-08 14:55:02 +02:00
ac8f2e431e fix a few cut-n-paste issues 2019-10-08 14:49:20 +02:00
cf11e4be3c Added documentation for single/improper 2019-10-08 11:51:19 +01:00
b8b07061d4 Added function for creating an improper using single/improper 2019-10-08 10:46:27 +01:00
1f372e27e9 initialize/reset more unallocated pointer variables to NULL 2019-10-08 02:41:35 -04:00
ac82f78667 do not reset box (i.e. apply shrink-wrapping) for systems without atoms 2019-10-08 02:40:08 -04:00
63c1ffd605 Clean up langevin gjf documentation, fixed potential langevin gjf bugs 2019-10-07 19:41:17 -07:00
7794304f88 Merge branch 'master' of https://github.com/lammps/lammps 2019-10-07 18:22:27 -07:00
85d62e4f57 Merge branch 'master' of https://github.com/charlessievers/lammps 2019-10-07 17:50:55 -07:00
80610d82df Merge branch 'collected-small-changes' of github.com:akohlmey/lammps into collected-small-changes 2019-10-07 18:57:44 +02:00
178ca78dd9 add TODO comment for experimental and thus currently undocumented CMake option 2019-10-07 18:57:28 +02:00
8c063343a1 Merge branch 'master' into collected-small-changes 2019-10-07 18:54:33 +02:00
edda8a4d07 Merge pull request #1688 from junghans/external_kokkos
cmake: allow to build against an external libkokkos
2019-10-07 18:25:17 +02:00
22df08f01b Merge branch 'master' of github.com:lammps/lammps into kk_snap_opt 2019-10-07 08:58:09 -06:00
9fc32f5f3f small update to naming conventions 2019-10-05 12:38:28 -04:00
65edb2a601 Merge pull request #1598 from alxvov/OSO
Adding the conjugate gradient algorithm and L-BFGS to the SPIN package
2019-10-05 14:11:17 +02:00
043606d351 Merge pull request #1701 from athomps/neigh_check_distance_box
Fixed error in neighbor distance check for box dimensions
2019-10-05 14:10:03 +02:00
ed467d8867 Merge branch 'master' of github.com:alxvov/lammps into OSO
- solved conflict in doc/src/fix_nve_spin.txt
2019-10-04 08:56:49 -06:00