Commit Graph

31246 Commits

Author SHA1 Message Date
3cee69a077 correct Kokkos device/arch info ouput in CMake summary 2023-01-11 18:15:56 -05:00
69ffe71595 update unit tests for code corrections 2023-01-11 07:45:50 -05:00
16fa033111 fix issues with bundled meam/spline potentials 2023-01-11 06:40:54 -05:00
8e494aa771 updates and bugfixes for liblammpsplugin plugin loader for LAMMPS shared lib 2023-01-11 06:11:46 -05:00
f8de1b1a75 use official API for utils::logmesg(), stricter/consistent checking for integer and floats 2023-01-11 05:54:35 -05:00
de89a25a25 final CMake sync with upstream 2023-01-11 05:03:00 -05:00
293d0cdb58 fix typo 2023-01-11 01:26:54 -05:00
011f2651ee update 2023-01-11 01:26:48 -05:00
a8d3c43a77 update version 2023-01-11 01:26:35 -05:00
c19641f8b3 synchronize CMake scripting with upstream 2023-01-11 01:04:32 -05:00
6596b343ff sync docs with fire minimizer code features 2023-01-10 21:55:56 -05:00
b6dbb0330c update list of commands in pygments LAMMPS lexer 2023-01-10 21:55:56 -05:00
0dd138666a update for accelerated versions 2023-01-10 21:55:56 -05:00
33b9fec150 synchronize sphinx configuration with upstream 2023-01-10 21:55:56 -05:00
32b020a165 Increase communication cutoff for TIP4P pair styles, if needed
This avoids error of H atom not found when the O atom is a ghost.
2023-01-10 21:55:56 -05:00
c1db230331 Fix bug in Kokkos ReaxFF on GPUs 2023-01-10 21:55:56 -05:00
254c052ecc Fix GPU tag issues in other Kokkos styles 2023-01-10 21:55:56 -05:00
8e889dfa7c offset is not used (by construction of the potential) 2023-01-10 21:55:55 -05:00
5b6a52a646 correct suffix handling with compute fep 2023-01-10 21:55:55 -05:00
55f56deb63 bugfix for minimization with KOKKOS when using fix box/relax 2023-01-10 21:55:55 -05:00
bfe127a720 cosmetic 2023-01-10 21:55:55 -05:00
d95c8911a3 tweak intel compiler settings 2023-01-10 21:55:55 -05:00
0380f9d854 consistently prefix deep_copy() with Kokkos:: 2023-01-10 21:55:55 -05:00
71b1d60363 bugfix for gaussian bond/angle styles to avoid premature truncation of potential 2023-01-10 21:55:55 -05:00
8b1f92fabd better error handling when reading table files 2023-01-10 21:55:55 -05:00
419af0cf28 dead code removal 2023-01-10 21:55:45 -05:00
9030c59932 bugfix for nm/cut argument parsing 2023-01-10 21:55:21 -05:00
ee88078150 bugfix for DPD with exclusions other than 0.0 or 1.0 2023-01-10 21:55:21 -05:00
04451f6072 recover compilation 2023-01-10 21:55:21 -05:00
2364f7f08b bugfix for incorrect stress tally in dihedral style table 2023-01-10 21:55:21 -05:00
7f82a58f51 auto loop optimizations 2023-01-10 21:55:21 -05:00
1caf074ba1 avoid excess string copy in auto loops 2023-01-10 21:55:20 -05:00
34677f78c2 initialize ADIOS dumps only the first time when used in multiple runs 2023-01-10 21:55:20 -05:00
fe138fc75c add support for building/using the ADIOS package without MPI
This needs the ADIOS2 installation being configured accordingly.
2023-01-10 12:38:20 -05:00
31c324ff61 remove references to long obsolete .d dependency files 2023-01-10 12:32:22 -05:00
30564ed8b7 import traditional build system updates and fixes from develop branch 2023-01-10 12:16:59 -05:00
f05bfe45a8 Synchronize GitHub related files and settings with develop branch 2023-01-10 11:50:49 -05:00
88c8b6ec6f Merge pull request #3460 from akohlmey/maintenance-2022-06-23
Second round of maintenance fixes and backports for the stable release
patch_23Jun2022_update2 stable_23Jun2022_update2
2022-11-03 12:21:59 -04:00
f01e28f574 add missing parts to ELECTRODE package docs for traditional make. sync with upstream. 2022-10-27 16:29:28 -04:00
96627d27b1 add support to detect the BuildID of Windows 10 22H2 2022-10-27 12:56:30 -04:00
b3fc574a6a use googletest aliased targets consistently 2022-10-26 22:46:31 -04:00
8a3f7560c9 drop special OpenMP flags from presets. Will be detected by FindOpenMP. 2022-10-26 22:46:21 -04:00
8406e92a9a downgrade KOKKOS OpenMP check to version 3.1
need to apply special exception for NVHPC/PGI compilers
2022-10-26 22:46:13 -04:00
3b376b4448 modernize OpenMP detection and check for omp.h in CMake 2022-10-26 22:46:03 -04:00
ca3b7be623 add compatibility to VTK version 9.0 and above 2022-10-24 16:25:25 -04:00
c825c52d2f update required version 2022-10-23 03:45:57 -04:00
0ea0e4ce59 modernize calls to access the list of fixes in the Modify class 2022-10-23 03:16:26 -04:00
d53d4b4d99 use inline insertion sort for short array 2022-10-23 03:16:13 -04:00
b37cd14dd1 avoid superfluous calls to utils::strdup and improve error messages 2022-10-23 03:15:58 -04:00
a921a6bdc1 silence compiler warning about not copying the final null byte 2022-10-23 03:15:47 -04:00