7c723b4852
add support for a region keyword to fix edpd/source and fix tdpd/source
2023-04-21 17:58:28 -04:00
2cf690cc99
fix typo
2023-04-19 13:28:02 -04:00
bc27e96d23
Merge pull request #3737 from athomps/gcmc-region-triclinic
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Updated fix gcmc log file contents with correct species counts
2023-04-18 21:30:22 -04:00
5547492d34
Updated log file contents with species counts
2023-04-18 14:03:04 -06:00
82e17c8aec
add image outputs to both couple codes
2023-04-14 12:11:09 -06:00
32f9800943
testing new version of coupling
2023-04-14 11:00:59 -06:00
7f35ecffcc
more edits
2023-04-13 12:55:38 -06:00
b3c00f3edf
modernize a couple examples/COUPLE apps
2023-04-12 15:59:12 -06:00
ff5b4e971d
Merge pull request #3725 from akohlmey/collected-small-changes
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Collected small changes and fixes
2023-04-10 13:53:16 -04:00
dd5763cd3a
Fixing interation cutoff in gran wall/region, rerunning relevant examples
2023-04-06 13:58:06 -06:00
4c403e5b71
close and finalize LAMMPS instance in MLIAP example python scripts
2023-04-06 12:58:30 -04:00
44fc1c55f6
Merge branch 'develop' into remove-fix-latte
2023-03-29 14:43:45 -06:00
f9edd3a539
Merge pull request #3664 from hoba87/develop
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simplify execution of mliap pytorch example
2023-03-28 18:05:22 -04:00
47c2103930
Merge pull request #3652 from athomps/gcmc-region-triclinic
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Moved region check from constructor to init()
2023-03-23 17:48:07 -04:00
51e3db6a6d
Updated LJ reference logfile because reported atom counts were mysteriously wrong
2023-03-23 14:02:40 -06:00
ed8b06a756
Merge pull request #3628 from lammps/fix-mdi-qmmm
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Add a fix mdi/qmmm command for running QMMM via MDI code coupling
2023-03-23 12:33:00 -04:00
667ba0febb
update README files to have more conventional options and settings
2023-03-22 20:42:54 -04:00
737ef160d2
one more file
2023-03-22 13:47:07 -06:00
5e85baf919
update of quantum code repos and instructions and log files
2023-03-22 13:46:20 -06:00
375eb46450
README edits
2023-03-22 09:24:04 -06:00
a232915e71
update example logs for changed granular pair style
2023-03-16 22:37:58 -04:00
4e221803b0
Merge branch 'develop' into collected-small-changes
2023-03-16 20:53:04 -04:00
b41d826e0a
Merge branch 'develop' into gran-temp
2023-03-16 17:44:36 -04:00
5c5e7b7e48
update fix mscg example
2023-03-16 08:39:23 -04:00
c472821d67
remove outdated MDI example folder
2023-03-14 23:31:16 -04:00
d459c3763d
whitespace
2023-03-14 13:53:04 -04:00
c3dba53040
update for more recent MDI and PySCF versions
2023-03-14 13:52:56 -04:00
04dfda9952
update MDI LAMMPS-on-LAMMPS examples
2023-03-14 12:00:20 -04:00
d8d1235773
update MDI library version to 1.4.16
2023-03-14 11:59:19 -04:00
2d8936068e
Merge pull request #3679 from ndtrung81/dielectric-bugfixes
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Dielectric package doc update and bugfix
2023-03-13 18:27:50 -04:00
6cb45a5e0f
update minimal MDI test/demo for current code
2023-03-12 17:08:17 -04:00
1887495434
Merge branch 'develop' into fix-mdi-qmmm
2023-03-12 00:53:40 -05:00
c2d0734bc4
rerun updated examples and record log files
2023-03-07 14:36:56 -05:00
a3c9029664
Reverted the cutoff to 20.0 for in.nopbc
2023-03-07 12:02:56 -06:00
b65623ef1f
Added back comments to data.sphere
2023-03-07 11:57:49 -06:00
9e57bedea2
Fixed bugs when mistakenly replacing all "NULL" with "nullptr" with FixPolarizeFunctional, reduced the number of induced charges so that in.nopbc with dof finishes in a reasonable time
2023-03-07 11:51:14 -06:00
353e0820e3
capture log files for dielectric examples
2023-03-07 12:26:43 -05:00
b08fe855a1
Increased the default max iterations to 50, put a note on setting the local epsilon for charged interface particles to be the mean dielectric value
2023-03-02 15:12:59 -06:00
765d792f40
Merge remote-tracking branch 'github/develop' into collected-small-changes
2023-03-01 21:03:03 -05:00
c8696478b7
Merge pull request #3648 from jrgissing/bond/react-updates+tests
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Bond/react updates
2023-03-01 21:01:59 -05:00
87a9695c64
Merge remote-tracking branch 'github/develop' into collected-small-changes
2023-03-01 20:37:50 -05:00
d44ba14030
Merge pull request #3657 from akohlmey/custom-wall-fixes
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Add fix wall/table and fix wall/lepton for customizable wall fixes
2023-03-01 20:16:56 -05:00
202a22ea68
Merge branch 'develop' into collected-small-changes
2023-02-28 11:27:26 -05:00
64d5317d19
hint to generate needed file for mliap pytorch example
2023-02-28 10:07:46 +01:00
446913f2f3
make ramp more flexible by defining lambda through a variable
2023-02-27 16:01:17 -05:00
2bd6cde4e8
add reference output
2023-02-26 00:19:39 -05:00
666be5c3d9
add log files for example run
2023-02-25 23:47:34 -05:00
bb17541c30
add simple example for transforming a pure metal into an alloy
2023-02-25 16:01:26 -05:00
60129958c8
refactor how properties computed by the fix are accessed
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lambda is no an (intensive) scalar property
and the vector property only has the potential energies.
pressure is accessed via compute pressure/alchemy.
2023-02-25 12:47:49 -05:00
c288a20077
add progress information to screen or universe logfile
2023-02-25 11:14:56 -05:00
