Commit Graph

21367 Commits

Author SHA1 Message Date
a9d1932032 update singularity definition files to include kim-api packages 2020-06-07 16:11:26 -04:00
dd746f7695 whitespace 2020-06-07 15:59:50 -04:00
bbb6f408be fix syntax issue 2020-06-07 15:56:18 -04:00
4da8ff3d21 avoid division by zero 2020-06-07 15:47:46 -04:00
fc1be785fc port bugfix from fix qtb to fix qbmsst and some output simplification 2020-06-07 15:33:32 -04:00
5c1236084c correctly compute the size of the maxexchange buffer. we put all fixes into one buffer. 2020-06-07 14:37:20 -04:00
db9543ede2 use more common coding patterns, set maxexchange, use correct argument conversion functions 2020-06-07 14:36:41 -04:00
cee7cd5fe9 consolidate enumerator for per-atom array data types 2020-06-07 11:44:42 -04:00
edc7237f15 more thorough checking if the reaxff force field is consistent. 2020-06-07 10:46:50 -04:00
586f2c00b0 add missing linefeed character 2020-06-07 10:13:35 -04:00
09a005414b recover compilation of the KIM package 2020-06-06 17:27:10 -04:00
64664d0b18 Merge pull request #2122 from rbberger/refactor-table-reading
Refactor table reading
2020-06-06 16:44:57 -04:00
7088746e36 update logs 2020-06-06 11:59:38 -04:00
a1afb8e1da when communicating always communicate global atom ID and convert back 2020-06-06 11:53:50 -04:00
d343d2beb1 whitespace and output fixes. 2020-06-06 11:10:32 -04:00
92012ef047 fix permissions 2020-06-06 10:44:09 -04:00
8a71645a4b must pass the filename, not file pointer to error message 2020-06-06 10:41:42 -04:00
17306c0469 Merge branch 'master' into add-ECO-DF 2020-06-06 10:37:12 -04:00
4e05eaa811 reduce compiler warnings, use new error class and format options 2020-06-06 10:37:06 -04:00
8bfabcab56 update fix orient/eco example to be aligned with LAMMPS conventions 2020-06-06 10:36:35 -04:00
4832de4a76 add to USER-MISC README file 2020-06-06 10:03:21 -04:00
9482f7f834 fix up typesetting of docs, spelling, and integrated into fix command table 2020-06-06 10:01:07 -04:00
890c5fc1be update src/.gitignore 2020-06-06 10:00:11 -04:00
c6abcc8518 must not include installed copies of package files 2020-06-06 09:59:59 -04:00
2ed8652545 Fix whitespace 2020-06-05 19:15:31 -04:00
52f5968695 Merge remote-tracking branch 'origin/master' into refactor-table-reading 2020-06-05 19:09:24 -04:00
a57a8a879b Merge pull request #2129 from akohlmey/collected-small-changes
Collected small changes for the next patch release
2020-06-05 18:49:47 -04:00
4f804f58e3 Merge remote-tracking branch 'origin/master' into refactor-table-reading 2020-06-05 16:41:05 -04:00
04d7eacc2f remove .c_str() in several places because it is no longer neede 2020-06-05 16:40:48 -04:00
c7ef89dc4a Merge branch 'master' into collected-small-changes 2020-06-05 16:40:30 -04:00
2203e1e9e5 Change next_dvector(n, buf) to next_dvector(buf, n) 2020-06-05 16:40:14 -04:00
12386945d5 Merge pull request #2128 from akohlmey/more-fmtlib-and-string
Use {fmt}, std::string and utils::logmesg() in more places
2020-06-05 16:37:38 -04:00
9bf47cd9f3 make KOKKOS library compilation compatible with mode=shared 2020-06-05 13:58:11 -04:00
8b5469590d Fix error message in pair_airebo.cpp 2020-06-05 12:25:10 -04:00
4d99092e37 Fix error message in bond_table.cpp 2020-06-05 12:23:20 -04:00
a42a86c0d2 Remove more c_str() 2020-06-05 12:13:41 -04:00
7df387f7d5 Merge remote-tracking branch 'origin/master' into refactor-table-reading 2020-06-05 12:09:57 -04:00
cd08dc8425 Simplify by using next_values() helper 2020-06-05 11:57:12 -04:00
78468f41d5 make definition consistent and silence a whole bunch of warnings from recent clang versions 2020-06-05 11:52:06 -04:00
f547d66104 Merge branch 'master' into more-fmtlib-and-string
# Conflicts:
#	src/write_restart.cpp
2020-06-05 11:13:44 -04:00
863828540a Merge pull request #2127 from akohlmey/error-using-string-class
Use std::string in arguments to Error class function
2020-06-05 11:05:14 -04:00
9ba84f37d7 add workaround for compilation error with MPIIO on windows due to old ROMIO API 2020-06-05 11:03:17 -04:00
cbd4f59d45 updates "add eco df"
We think we followed all your requests/advice/suggestions (thanks!). We were unable to compile the current master (!) on Ubuntu and MacOS unless we added -std=c++11 to the Makefile(s) compiler flags. Note that this is NOT related to this pull request / the ECO Force. With  this compiler flag, the current master works well with the fix_orient_eco (now renamed). The fix has been moved to USER-MISC (but we hope to get it to MISC later). We can't "make style_check ", but we have added our command to commands_fix.rst. We don't know GitHub well enough, so we don't know how to make sure that the PR #2122 was already included in the master, which we downloaded today.
2020-06-05 14:57:59 +02:00
ad76f5267b whitespace fix 2020-06-05 08:54:41 -04:00
d874e8a2be remove TAGINT_FORMAT from ntopo styles 2020-06-05 08:45:18 -04:00
73c6171ad6 get rid of BIGINT_FORMAT and use utils::logmesg() 2020-06-05 08:19:45 -04:00
8ed32f95b3 simplify writing restarts a bit more 2020-06-05 07:31:39 -04:00
8814fc0147 use const char * for compatibility with std::string.c_str() 2020-06-05 07:31:02 -04:00
3e289bbc5e fixup whitespace 2020-06-04 22:37:32 -04:00
0ee1393955 fix typo 2020-06-04 22:17:50 -04:00