Commit Graph

198 Commits

Author SHA1 Message Date
1aeecfb0cf Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
# Resolved Conflicts:
#	doc/Manual.txt
#	doc/pair_reax.html
#	src/USER-PHONON/fix_phonon.cpp
2015-12-16 07:31:09 -05:00
31f22919ab git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14369 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-12-15 16:03:53 +00:00
9f38620e13 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14368 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-12-15 16:01:54 +00:00
5affb6c013 Merge branch 'master' into lammps-icms
# Resolved Conflicts:
#	doc/Manual.html
#	doc/Manual.txt
#	doc/pair_hybrid.txt
#	doc/pair_reax.html
#	doc/pair_reax.txt
#	doc/pair_reax_c.txt
#	src/MANYBODY/pair_polymorphic.cpp
2015-12-11 07:33:14 -05:00
2cf6305dc1 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14351 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-12-10 17:40:52 +00:00
07554c8efe Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
# Resolved Conflicts:
#	doc/Manual.html
#	doc/Manual.txt
#	lib/colvars/colvarmodule.h
#	src/Makefile
#	src/min_cg.cpp
#	src/min_fire.cpp
#	src/min_quickmin.cpp
#	src/min_sd.cpp
#	src/respa.cpp
#	src/version.h
2015-10-23 07:08:37 -04:00
336aa4093e git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14181 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-10-23 00:06:46 +00:00
f8d13ac853 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14174 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-10-22 23:36:53 +00:00
823cc16bdf Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
# Resolved Conflicts:
#	doc/Manual.html
#	doc/Manual.txt
#	doc/Section_start.txt
#	doc/pair_hybrid.txt
#	doc/pair_reax.html
#	src/CORESHELL/pair_lj_cut_coul_long_cs.cpp
#	src/KSPACE/pair_lj_cut_coul_long.cpp
#	src/KSPACE/pair_lj_cut_coul_msm.cpp
#	src/MC/fix_bond_break.cpp
#	src/MC/fix_bond_break.h
#	src/MC/fix_bond_create.cpp
#	src/MC/fix_bond_create.h
#	src/USER-FEP/pair_lj_cut_soft.cpp
#	src/USER-MISC/README
#	src/USER-MISC/fix_ti_spring.cpp
#	src/output.cpp
2015-10-22 08:17:31 -04:00
ddfb996d8e git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14127 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-10-21 18:16:47 +00:00
5e861837d8 update input for current code 2015-09-09 20:31:43 -04:00
c9188c0095 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13956 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-08-28 23:50:01 +00:00
3591af9f33 add compute tally test and usage reference examples 2015-08-25 17:37:26 -04:00
4bf254972b add old inpu examples for user-tally. need to rework for release 2015-08-20 20:39:53 -04:00
5107280519 Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
# Conflicts:
#	doc/Manual.html
#	doc/Manual.txt
2015-08-06 00:51:11 -04:00
7e1de6da04 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13834 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-08-04 20:57:54 +00:00
6c8830b828 Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
# Conflicts:
#	doc/Manual.html
#	doc/Manual.txt
2015-07-28 13:26:45 -04:00
9ed741e904 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13738 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-07-27 18:12:18 +00:00
3dfb446590 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13729 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-07-27 14:57:19 +00:00
7af18596a1 Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
# Conflicts:
#	doc/Manual.html
#	doc/Manual.txt
#	src/fix_ave_histo.cpp
2015-07-23 06:26:52 -04:00
6864dfa2d1 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13682 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-07-22 15:52:49 +00:00
63802b7688 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13674 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-07-22 15:26:43 +00:00
c3fd41010d git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13464 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-05-15 16:33:17 +00:00
21db4bc68c update to USER-FEP docs and examples 2015-05-15 00:59:50 -04:00
09bb220083 Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.html
	doc/Manual.txt
2015-02-25 17:03:53 -05:00
cb912c1954 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13150 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-02-24 16:28:56 +00:00
74ba3d3095 Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.html
	doc/Manual.txt
2014-12-01 11:27:44 -05:00
6d4200ec45 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12800 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-11-26 16:05:29 +00:00
1bfeda4e3e git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12799 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-11-26 16:04:35 +00:00
475aa20270 Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.html
	doc/Manual.txt
	doc/Section_intro.txt
	doc/fix_gle.txt
	doc/fix_ipi.txt
	examples/USER/i-pi/README
	src/USER-MISC/README
	src/USER-MISC/fix_gle.cpp
	src/USER-MISC/fix_ipi.cpp
	src/USER-MISC/fix_ipi.h
2014-11-25 15:01:31 -05:00
6f94c97e48 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12786 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-11-24 19:52:27 +00:00
223eea1510 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12784 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-11-24 19:38:27 +00:00
a52ad2d6dd git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12772 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-11-24 17:14:39 +00:00
72bf576c1a Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.html
	doc/Manual.txt
	src/compute_force_molecule.cpp
2014-11-21 10:05:55 -05:00
d845ef5e8f ATC version 2.0, date: Nov20
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12758 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2014-11-20 18:59:07 +00:00
7d179faa17 update colvars example outputs 2014-11-06 16:46:41 -05:00
aa9c30ae99 update reference log file for colvars examples 2014-10-29 18:35:52 -04:00
fa9c01c701 include histogram output in metadynamics example 2014-10-27 14:53:55 -04:00
c841d1dcb0 update colvars reference log files with current LAMMPS/colvars version 2014-10-26 04:46:59 -04:00
a8a95efae3 simple input examples for testing more colvars use cases for syntax and files generated 2014-10-25 16:36:18 +02:00
9dd1fd29b2 Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	src/MAKE/MORE/Makefile.debug
	src/MAKE/MORE/Makefile.openmpi
	src/MAKE/MORE/Makefile.serial
	src/MAKE/MORE/Makefile.ubuntu_simple
	src/MAKE/Makefile.g++
	src/MAKE/Makefile.serial-opt
2014-09-27 06:34:33 -04:00
bf8b5e4d63 Fixing broken basal example
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12562 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2014-09-26 17:00:51 +00:00
62c95d86a8 Fixing broken USER-EFF example
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12560 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2014-09-26 14:57:08 +00:00
e162a292b6 Merge remote branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.html
	doc/Manual.txt
	lib/cuda/Makefile.defaults
2014-09-12 13:07:05 +02:00
bbc60e3aef git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12494 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-09-11 16:54:18 +00:00
dbc55a403f overhaul of fix ipi to be more consistent with LAMMPS programming conventions 2014-08-12 11:33:59 -04:00
f78d0004f3 include example for i-PI use with fix ipi 2014-08-11 18:00:14 -04:00
57b8a339eb clean up reading of C matrix and fix missing scaling bug 2014-08-05 01:51:31 -04:00
8821eb0518 cleaned up code some. doesn't seem to fully work yet. 2014-08-05 01:14:23 -04:00
c46236d706 update input examples to be more similar to other LAMMPS examples 2014-08-04 23:09:34 -04:00