Commit Graph

14134 Commits

Author SHA1 Message Date
66e885b6e5 Merge branch 'master' into collected-small-changes
# Conflicts:
#	src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp
#	src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp
2021-04-02 17:57:54 -04:00
b976c2d13c Merge pull request #2679 from akohlmey/more-unittests
Expand unit tests
2021-04-02 17:51:29 -04:00
1c43b4a4c3 Merge branch 'fix_ave_chunk_cdof_bug' into collected-small-changes 2021-04-02 17:50:33 -04:00
abfe8bab59 fix uninitialized memory access issues. consolidate enumerators. 2021-04-02 17:32:29 -04:00
2a10b5ba69 fix bug causing segfaults 2021-04-02 17:21:34 -04:00
7d85461e97 Prevent compilation from breaking with Python 2 2021-04-02 16:32:25 -04:00
79a413aeea replace calls to sqrt() in constant initializers with precomputed numbers.
this also moves those arrays into a separate file and out of the header
2021-04-02 16:15:28 -04:00
c62b1b1050 Merge remote-tracking branch 'github/master' into collected-small-changes 2021-04-02 16:08:51 -04:00
e613da98d6 Merge pull request #2650 from akohlmey/plugin-loader
New PLUGIN package with a LAMMPS plugin loader command
2021-04-02 15:08:44 -04:00
2dfafe4adb add is_file() special variable function and unit tests for it 2021-04-02 12:07:43 -04:00
994ee59fd5 correct single() functions for USER-YAFF pair styles to be consistent with compute() 2021-04-01 12:42:48 -04:00
9ac246011e remove flags and setup for multi-cutoff r-RESPA support which is missing 2021-04-01 12:14:40 -04:00
e7422a6bf7 silence compiler warnings 2021-04-01 11:28:18 -04:00
3668ce1374 Merge branch 'master' into more-unittests
# Conflicts:
#	unittest/testing/core.h
2021-04-01 11:11:18 -04:00
0b60650c1b Merge branch 'master' into collected-small-changes 2021-04-01 10:11:59 -04:00
21c934d2cd Merge pull request #2682 from rbberger/python_unittests
Python package unit tests
2021-04-01 10:11:26 -04:00
f2a28dea4e Merge pull request #2686 from ProfessorMiller/master
Better handling of incorrect boundary conditions for KIM models with Coulomb interactions
2021-04-01 10:11:08 -04:00
b5d2f5f2b2 address whitespace issues 2021-04-01 09:45:01 -04:00
d72b390c41 correct check for box changing fixes 2021-04-01 08:48:39 -04:00
bed57e02f7 avoiding static variable 2021-03-31 16:18:05 -04:00
7699fb3708 generalize some checks in fix rigid and rigid/small 2021-03-31 15:55:31 -04:00
c53f2d4629 correct USER-OMP respa/omp check 2021-03-31 14:55:07 -04:00
0bde6c82a3 remove newton bond off check again 2021-03-31 14:40:54 -04:00
e1cf6a312f Corrected error message 2021-03-31 18:56:50 +01:00
183b30abd7 use strmatch() consistently to detect respa and verlet runstyles with optional suffix 2021-03-30 18:30:22 -04:00
e22f9c4768 newton bond off does not work with atom style template currently 2021-03-30 16:48:51 -04:00
2e86cb4176 for atom style template number of bonds does not depend on newton_bond 2021-03-30 15:33:11 -04:00
8f5d11c0c5 add missing return 2021-03-30 13:34:31 -04:00
2b5af8894e Merge branch 'master' of git://github.com/lammps/lammps 2021-03-30 11:36:23 -04:00
24d9d6d17d update to kim_interactions to correctly handle incorrect combinations of periodic and f/s boundary conditions when the SM has to choose between kspace or real space coulomb calculations. This version treats "p p p" in kspace, "f f f" or "s s s" in realspace, and "p p f" with kspace-slab. all others are sent to kspace-slab and then caught there as an error. 2021-03-30 11:27:39 -04:00
71dbf43e09 error our when Fix:set_molecule() is called with unsupported fixes
also add example input for using fix rigid/small with fix deposit
2021-03-30 11:10:59 -04:00
57ad6d50f4 silence compiler warnings 2021-03-30 10:36:00 -04:00
40f1a74a7f use more precise detection of verlet and respa run styles 2021-03-30 07:37:39 -04:00
3041561383 add proper r-RESPA support for fix cmap 2021-03-30 07:36:53 -04:00
20e6174e59 cannot use tokenizer for parse_args() as the search for commata must be away of parenthesis 2021-03-29 21:11:07 -04:00
ea808b8563 Merge branch 'master' into more-unittests 2021-03-29 15:27:26 -04:00
2b11848fcc bugfix from dan bolintineanu for issue reported on lammps-users by Deng Pan 2021-03-29 15:26:57 -04:00
9058216a54 silence compiler warnings 2021-03-29 14:11:56 -04:00
180d2895c4 Merge pull request #2678 from akohlmey/collected-small-changes
Collected small changes and fixes
2021-03-29 14:05:08 -04:00
1e3f1c584c simplify by using utils::strdup() fmt::format() and reorder includes 2021-03-29 08:12:37 -04:00
806f4e73ed make dihedral style table/cut a derived class from table and remove redundant code 2021-03-29 07:32:43 -04:00
e481eb1154 simplify by using utils::strdup() fmt::format() and reorder includes 2021-03-29 07:29:14 -04:00
b32570c15e simplify by using utils::strdup() and reorder includes 2021-03-28 22:22:13 -04:00
31726f56e6 refactor group2ndx and ndx2group commands to use fmtlib, tokenizer and utils 2021-03-28 14:48:39 -04:00
dfb18caf5a simplify using utils::strdup(), update order of include files 2021-03-27 16:25:55 -04:00
436be824e1 use std:: namespace for STL containers 2021-03-27 12:10:40 -04:00
0b73ab96d2 avoid replicated code, consolidate variables and element mapping 2021-03-27 12:09:36 -04:00
35abca1b40 we should include <strings.h> when using strcasecmp() 2021-03-27 11:18:59 -04:00
b1efdda75c Merge remote-tracking branch 'origin/master' into more-unittests 2021-03-26 11:35:22 -04:00
756d935d06 use std:: namespace for STL containers 2021-03-25 21:13:24 -04:00