Commit Graph

4586 Commits

Author SHA1 Message Date
337527282d Added the documentation for atom style dielectric and for compute efield/atom 2021-06-07 16:36:45 -05:00
f7ca10b070 update documentation towards more complete integration
this includes the following steps:
- added missing sections about the packages (incomplete)
- added missing files for the pair styles and the compute (incomplete)
- merge fix doc files into a single file (incomplete)
- link to added styles from Commands overvies and style lists (incomplete)

major part that is missing is the documentation of the atom style and
the description of the file format in the read_data docs.
there should probably also additions to the `set` command to set those
properties from input scripts.
2021-06-05 21:00:35 -04:00
13b8c63e7a Merge branch 'master' into user-dielectric 2021-06-05 11:14:44 -04:00
f92bee868a whitespace fixes 2021-06-05 11:12:58 -04:00
f2dad0486b Integrating documentation, misc fixes in compute 2021-06-04 10:06:05 -06:00
5f4bd99544 Merge branch 'master' into track-contacts 2021-06-04 08:42:51 -04:00
1358f4549b doc updates for MISC package 2021-06-04 08:39:00 -04:00
2500169193 whitespace 2021-06-04 00:57:26 -04:00
337ba1f729 fix spelling issues 2021-06-04 00:56:24 -04:00
8e082c2f6a complete integration into manual 2021-06-04 00:56:09 -04:00
80c90d8ee2 fix broken links/references 2021-06-04 00:34:37 -04:00
067fd48b57 Merge remote-tracking branch 'github/master' into collected-small-changes
# Conflicts:
#	python/lammps/__init__.py
#	python/lammps/core.py
2021-06-04 00:28:32 -04:00
ed624b518e update windows specific instructions for running LAMMPS for latest package 2021-06-03 16:51:39 -04:00
415f33134b fix typos in Kolmolgorov-Crespi potential formula 2021-06-03 13:12:43 -04:00
479622e57d Adding compute fabric 2021-06-02 14:17:15 -06:00
80f28e7fa9 fixing merge conflicts, update to master 2021-06-02 12:33:37 -06:00
b2ed89b21f Updating documentation 2021-06-02 12:02:02 -06:00
3d991cda6f Remove pypar from docs 2021-06-02 11:13:44 -04:00
c12f7e226b More cleanup to fix polarize*, access to the per-atom variables from the Atom class, and updates to doc pages 2021-06-01 11:22:14 -05:00
7a52cfcc01 Added a doc page for the fix polarize/* 2021-05-28 16:27:03 -05:00
bd1c5592ab Merge pull request #2784 from akohlmey/set-python-home
Internally set PYTHONHOME for LAMMPS on Windows
2021-05-27 16:45:34 -04:00
129c517abe link to copy of GPLv2 inside of LAMMPS distribution 2021-05-27 16:09:28 -04:00
98023e73b9 clarify GPL version and fix URLs 2021-05-27 15:44:56 -04:00
b4e5298bf8 Merge pull request #2783 from stanmoore1/kk_update_3.4.1
Update Kokkos library in LAMMPS to v3.4.1
2021-05-27 15:10:34 -04:00
86059433f6 Merge pull request #2570 from kipbarrett/pair_rann
Add new Package USER-RANN with pair style rann for using a neural network to compute energies and forces
2021-05-27 13:07:26 -04:00
8c8e4eaeec Update Kokkos arch list 2021-05-27 10:48:10 -06:00
e2f702ab63 Merge pull request #2768 from rbberger/doc_versions
Prepare LAMMPS manual to show multiple versions and downloads
2021-05-27 10:54:43 -04:00
40a5c2de5b Merge pull request #2782 from jrgissing/bond/react-doc-tweaks
Bond/react doc tweaks
2021-05-27 10:41:14 -04:00
0713e95873 integrate documentation 2021-05-26 16:55:51 -04:00
f703025c32 whitespace 2021-05-26 16:01:03 -04:00
4b37421318 Add word 2021-05-26 16:00:58 -04:00
c13b1b39ef Change title and add forum page link 2021-05-26 15:58:30 -04:00
012003c68a Merge branch 'master' into pair_rann
# Conflicts:
#	cmake/CMakeLists.txt
#	cmake/presets/all_off.cmake
#	cmake/presets/all_on.cmake
2021-05-26 15:17:30 -04:00
01212881d2 clarify docs 2021-05-26 00:05:21 -04:00
c723fe2345 Update fix_bond_react.rst 2021-05-25 23:54:43 -04:00
04f7cd0fb7 replace non-ASCII characters 2021-05-25 22:13:37 -04:00
04defbf49c Merge remote-tracking branch 'github/master' into collected-small-changes 2021-05-25 18:57:34 -04:00
c10812644d correct citation 2021-05-25 17:17:16 -04:00
8c9b29f9ec Merge branch 'pair-style-nnp' of github.com:singraber/lammps into pair-style-nnp 2021-05-25 14:52:50 -06:00
c55997abca Minor edits 2021-05-25 14:51:55 -06:00
9e1db61b41 Merge branch 'master' into pair-style-nnp 2021-05-25 16:44:55 -04:00
7cc00e3fed fix spelling 2021-05-24 16:21:48 -04:00
825182d06c fix typo. closes #2779 2021-05-24 15:33:48 -04:00
5eb818a02b the manual, especially the PDF version, has 3 parts 2021-05-24 14:44:47 -04:00
0a6401fb7b add missing colon 2021-05-24 14:39:39 -04:00
e4b3d8b632 correct table formatting that got broken by changing URLs 2021-05-24 14:38:03 -04:00
3f963ce249 update README/docs about generating the manual and accessing it online 2021-05-24 14:33:00 -04:00
09c19a936b update URLs in source code and manual 2021-05-24 14:18:20 -04:00
9bafefb4df Merge branch 'master' into update-homepage-url 2021-05-24 14:05:04 -04:00
61b1126c3d Merge branch 'master' into pair_rann
# Conflicts:
#	cmake/CMakeLists.txt
#	src/Makefile
2021-05-24 12:21:04 -04:00