b6d86e3c91
merge fix sources and move into USER-MISC package. clean up docs
2020-01-12 13:45:22 -05:00
755620acb7
correct documentation link
2020-01-12 13:10:37 -05:00
7cdd39b894
remove references to fix npt/cauchy which has its own doc file now
2020-01-12 13:10:26 -05:00
4a5511d00a
Merge branch 'collected-small-changes' into doc-styles-check
2020-01-12 10:19:22 -05:00
81c9b0b12e
small update to kspace overview
2020-01-12 10:17:56 -05:00
c93ee1045c
Merge branch 'collected-small-changes' into doc-styles-check
2020-01-12 10:13:34 -05:00
a0ecf539f6
clean up and correct some documentation link issues
2020-01-12 10:08:14 -05:00
675bd26085
Merge branch 'master' into doc-styles-check
2020-01-11 21:00:49 -05:00
587fc9d962
Merge pull request #1828 from lammps/post-patch-tweaks
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minor omissions in recent patch release
2020-01-11 21:00:09 -05:00
3b32141330
update documentation for style check
2020-01-11 20:47:10 -05:00
b2c4385661
clean up and correct fix style command overview
2020-01-11 20:02:23 -05:00
b4a87d79a0
make anchors and file names for lj/switch3/coulgauss/long consistent
2020-01-11 20:02:04 -05:00
05b68d9e0d
add missing pair style entries
2020-01-11 19:43:29 -05:00
019c70140f
add and correct kspace style entries
2020-01-11 19:43:18 -05:00
7ea366b3ce
fix formatting issue
2020-01-11 19:42:40 -05:00
ff7110028b
make doc of pair style mm3/switch3/coulgauss/long consistent and complete
2020-01-11 19:16:34 -05:00
84a975439a
clean up pair style command overview some
2020-01-11 19:04:02 -05:00
f713e9acc3
add missing bond style
2020-01-11 19:03:20 -05:00
297d31ab8f
clean up and update general command overview
2020-01-11 19:02:49 -05:00
7ebddb6088
Merge pull request #1829 from lammps/rerun-example
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added rerun example dir
2020-01-11 18:49:40 -05:00
e1849232b8
remove redundant lj/cut/tip4p/long/gpu entry and correct underline length
2020-01-11 16:21:42 -05:00
4f35682828
list added example folder in manual
2020-01-11 16:15:49 -05:00
cb8313d947
document added warning for fix bond/create
2020-01-11 16:08:37 -05:00
13ee0c1739
fix doc for fix propel/self to sphinx system
2020-01-10 13:42:43 +01:00
fe4f7899d2
Use x-axis along the particle's quaternion.
...
This change allows the fix to work in 2D as well.
2020-01-10 11:32:57 +01:00
7b977856b9
Update documentation of fix propel/self
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1. Remove reference to velocity alignment model.
2. Use reference to velocity-dependent friction for mode velocity
3. Add references to Fily & Marchetti and Bialké, Speck & Löwen for the
quaternion mode.
2020-01-10 11:32:54 +01:00
95784f7066
Updated documentation regarding types keyword.
2020-01-10 11:32:03 +01:00
2eb3f4e169
Updated documentation.
2020-01-10 11:32:01 +01:00
060c45d36e
Updated docs
2020-01-10 11:31:59 +01:00
074dfd8651
Commit before merging latest changes in master.
2020-01-10 11:31:57 +01:00
2a0081d135
Renamed fix active to fix propel/self
2020-01-10 11:31:20 +01:00
c93ca5b4a4
Added a fix to add active force to particles.
2020-01-10 11:31:16 +01:00
683d6ce9b3
'install' USER-REACTION package
2020-01-09 21:11:30 -07:00
c3922c7e35
rename package USER-REACTION
2020-01-09 20:07:41 -07:00
d1222bd3c0
minor omissions in recent patch release
2020-01-09 17:38:50 -07:00
6e2c3b7ce9
Merge branch 'master' into collected-small-fixes
2020-01-08 16:14:19 -05:00
481c647889
Merge pull request #1776 from Vsevak/tip4p_gpu
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GPU support for lj/cut/tip4p/long pair style
2020-01-08 15:35:39 -05:00
7051c941e5
Merge branch 'master' into collected-small-fixes
2020-01-08 15:05:03 -05:00
8ac2da792c
fix typo in fix ave/atom docs
2020-01-06 16:18:23 -05:00
0dda120ef8
Merge pull request #1800 from jibril-b-coulibaly/patch-1
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Correct typo in pair_granular.rst
2020-01-06 15:35:36 -05:00
1be8109618
Merge pull request #1798 from martok/meamc-dec19
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Collected MEAM/C additions
2020-01-06 15:07:08 -05:00
a6eb3ad458
bond/react: update docs (repackage)
2020-01-01 13:06:10 -05:00
402f5585ff
Merge pull request #1795 from jrgissing/bond/react-chiral_centers
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Bond/react chiral centers
2019-12-19 16:13:32 -05:00
1be9364a89
MEAM/C: document new reference structures
2019-12-17 21:55:38 +01:00
8030ff255d
Merge pull request #1794 from yafshar/master
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Certificate Verification
2019-12-12 13:24:21 -07:00
b0d0037f50
Certificate Verification
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if SSL report an error ("certificate verify failed") during the
handshake and thus refuses further communication with that server,
you can specify your own CA cert path by setting the environment
variable CURL_CA_BUNDLE to the path of your choice.
2019-12-12 12:57:34 -06:00
bde8b57f0b
Update fix_bond_react.rst
2019-12-11 23:10:11 -07:00
fba97b94cb
Don't change comm flags when there is only 1 MPI rank
2019-12-10 10:10:12 -07:00
e68824a392
Merge pull request #1772 from ohenrich/user-cgdna
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USER-CGDNA oxRNA2 Implementation
2019-12-06 12:23:47 -07:00
38e82cbbcc
This fix_deposit document added the description of the new rotation flag and its use.
2019-12-06 12:02:42 -05:00
