Commit Graph

24448 Commits

Author SHA1 Message Date
51a20175c9 more code formatting consistency changes for loops and conditionals 2020-12-30 09:47:45 -05:00
28de7e351a fix off-by-one bug (arrhenius type constraint uses 5 parameters) 2020-12-30 09:23:47 -05:00
4f5192fa86 silence compiler warnings 2020-12-30 09:21:11 -05:00
382ade15fe more consistent formatting of for/while loops and if statements 2020-12-30 09:09:08 -05:00
eef28b58ab remove extra word 2020-12-30 08:55:32 -05:00
0e83e792d0 add false positives 2020-12-29 20:31:00 -05:00
bc0b963f98 remove extra empty line 2020-12-29 20:25:42 -05:00
fec52f6a48 make CMake script formatting more consistent 2020-12-29 10:40:39 -05:00
76cb49d0a0 silence compiler warnings 2020-12-29 10:31:35 -05:00
086ac30267 whitespace 2020-12-29 10:21:14 -05:00
427d037747 Merge pull request #2508 from athomps/mliappy3
Add support for Python based models to the MLIAP package
2020-12-29 09:59:43 -05:00
5dc868ec30 whitespace 2020-12-28 09:37:13 -05:00
ab5a1f229e Merge pull request #2538 from akohlmey/next-patch-release
Step version strings for the next patch release
patch_24Dec2020
2020-12-24 10:30:13 -05:00
ddeae8a3ba step version string one more time 2020-12-23 20:15:52 -05:00
fb1cc56b2b Merge pull request #2542 from akohlmey/plumed-update-to-2.7
Add support plumed2 library version 2.7.0
2020-12-23 19:06:44 -05:00
41d6648ac9 Merge pull request #2504 from jrgissing/bond/react-add-logic-to-constraints
Bond/react: add logic to constraints
2020-12-23 15:39:30 -05:00
8e6b89cc81 fix multiplication issue in shake stats 2020-12-23 15:14:00 -05:00
c6fb9c3836 update supported version test in fix plumed for new version 2020-12-23 15:13:38 -05:00
78a20a988e add support for plumed version 2.7.0 and make it default 2020-12-23 14:23:39 -05:00
780c31c5f7 Updated PyTorch ReLU example to latest 2020-12-23 12:22:44 -07:00
06d7e5ab02 Merge pull request #2533 from akohlmey/pair-only-suffix
Add pair/only option for accelerator styles
2020-12-23 12:30:39 -05:00
9122b18c6f Updated README files 2020-12-23 10:17:55 -07:00
181ff5298f Merge pull request #2483 from z-gong/tgnh
Temperature-grouped Nose-Hoover thermostat for Drude polarizable model
2020-12-23 11:39:33 -05:00
37063ab61f Small tweaks 2020-12-23 09:22:27 -07:00
ddfa5c3e87 document pair/only keyword to package command 2020-12-23 10:09:54 -05:00
5aed28359b Merge pull request #2539 from lammps/doc-developer-notes
new Developer_notes doc page
2020-12-23 09:32:35 -05:00
6fd7d584c2 move release date 2020-12-23 01:05:52 -05:00
acd48f7553 Merge pull request #2517 from stanmoore1/kk_roundup
Fix Kokkos performance regression for small systems
2020-12-23 01:04:08 -05:00
2962fa561d Revert comm flags if pair/only is turned off 2020-12-22 21:08:07 -07:00
a02471967b Tweak DELTA constant 2020-12-22 16:08:21 -07:00
6dc18d4ff2 Merge pull request #2 from lubbersnick/mliappy3
switch setuptools back to distutils
2020-12-22 10:56:50 -07:00
cf3ae8cdd2 switch setuptools back to distutils 2020-12-22 09:59:50 -07:00
7a934eac37 use constexpr instead of define for better typechecking 2020-12-22 10:40:28 -05:00
d07cf22ac5 use parsed-literal sections to reduce spellchecking variable names 2020-12-22 10:25:40 -05:00
ce24d70ccc Add comments about smaller DELTA in atom_vec_kokkos.cpp 2020-12-22 08:15:51 -07:00
f9dd28dbbe Merge branch 'master' of github.com:lammps/lammps into kk_roundup 2020-12-22 08:11:57 -07:00
75eadabaf0 change ordering of sub sections 2020-12-22 08:02:28 -07:00
a1c5ed93ab new Developer_notes doc page 2020-12-21 17:13:32 -07:00
d46fb3cc96 Merge pull request #1 from lubbersnick/mliappy3
Changes to MLIAP python
2020-12-21 15:50:06 -07:00
e7fa0a6bac Changes to MLIAP python
- update lammps python package to use setuptools
- refactor MLIAP classes into lammps python package

lammps.mliap package
- change TorchWrapper to use dtype and device as arguments
- turn activation of mliappy into functions (was a class)
- add a check to see if python interpreter is compatible
  with python lib calls internal to lammps

mliap_model_python_couple.pyx:
- load models ending in '.pt' or '.pth' with pytorch rather than pickle
2020-12-21 11:51:10 -07:00
7c7f13faf5 step version strings for the next LAMMPS release 2020-12-21 10:21:53 -05:00
8678e82a82 Merge pull request #2530 from akohlmey/collected-small-changes
Collected small changes and bugfixes for the next patch release
2020-12-21 10:04:33 -05:00
800ff0f1c2 update spelling/grammar and false positives 2020-12-20 15:02:59 -05:00
24e2166357 add missing references 2020-12-20 15:02:01 -05:00
2e33887d0b Merge branch 'master' into tgnh 2020-12-20 14:48:49 -05:00
a13f70790a spelling 2020-12-18 23:02:28 -05:00
151110f07f refactor constant vs define in edip pair styles 2020-12-18 22:55:15 -05:00
2022dc0aa9 whitespace fixes 2020-12-18 22:45:26 -05:00
9f206b471e Merge branch 'master' into collected-small-changes 2020-12-18 22:41:27 -05:00
09028b27d4 Merge pull request #2423 from jtclemm/multi_ishan
Extend multi style neighbor lists to finite-sized particles
2020-12-18 22:39:01 -05:00