Commit Graph

111 Commits

Author SHA1 Message Date
a9b765721b Merge branch 'master' into lammps-icms
Resolved Conflicts:
	src/GPU/pppm_gpu.h
2012-02-15 09:42:34 -05:00
9add1067ad git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7789 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-02-14 20:44:45 +00:00
dd0057e650 Merge branch 'master' into lammps-icms
Resolved Conflicts:
	src/USER-MISC/pair_meam_spline.h
	tools/pymol_asphere/src/error.cpp
	tools/restart2data.cpp
2012-02-04 13:12:51 -05:00
905b59d00c restart2data support for meam/spline 2012-02-03 23:12:31 -05:00
9b3b8d2f3a git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7682 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-02-03 15:53:39 +00:00
474e194e48 atom_style dipole bugfix, new commandline flags
add support for pair style dipole/sf and angle style dipole.
fix bug related to recent changes in restart file format.
add command line flags to skip writing coefficient and velocities
2012-02-02 21:02:03 -05:00
2c42373bc8 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7644 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-02-01 16:07:44 +00:00
110e883827 correct support for coarse grain angle potentials. 2012-01-31 21:01:47 -05:00
7c72ca1422 add support for comb pair style 2012-01-07 20:56:00 -05:00
4ae1ca521c Merge branch 'master' into lammps-icms
Resolved Conflicts:
	lib/linalg/Makefile.gfortran
	lib/linalg/Makefile.mingw_cross
	src/GPU/pppm_gpu.cpp
	src/USER-REAXC/pair_reax_c.h
	tools/restart2data.cpp
2012-01-07 12:04:28 -05:00
edcd54b2eb git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7433 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-01-06 17:36:55 +00:00
2214992035 Merge branch 'openmp-master' into lammps-icms
Resolved Conflicts:
	.gitignore
	doc/fix_spring_self.txt
	lib/atc/Array.h
	lib/gpu/.gitignore
	src/.gitignore
	src/MAKE/Makefile.openmpi
	src/MAKE/Makefile.openmpi-omp
	src/STUBS/Makefile
	src/STUBS/mpi.c
	src/STUBS/mpi.h
	src/USER-CG-CMM/cg_cmm_parms.h
	src/dump.h
	src/fix_spring_self.cpp
	tools/restart2data.cpp
2011-12-31 19:59:13 -05:00
9259ae8699 Merge branch 'master' into lammps-icms
Resolved Conflicts:
	doc/Eqs/pair_coul_diel.jpg
	doc/Section_commands.html
	doc/Section_commands.txt
	doc/pair_coul_diel.html
	doc/pair_coul_diel.txt
	doc/processors.html
	doc/processors.txt
	examples/USER/imd/bucky_cnt_imd.vmd
	examples/USER/imd/in.bucky-plus-cnt
	examples/USER/imd/in.deca-ala-solv_imd
	examples/USER/imd/in.deca-ala_imd
	lib/gpu/Makefile.fermi
	lib/gpu/Makefile.lincoln
	lib/gpu/Makefile.longhorn
	lib/gpu/Makefile.serial
	lib/gpu/geryon/VERSION.txt
	lib/gpu/pair_gpu_device.cpp
	src/ASPHERE/atom_vec_ellipsoid.cpp
	src/CLASS2/Install.sh
	src/COLLOID/atom_vec_colloid.cpp
	src/DIPOLE/atom_vec_dipole.cpp
	src/GPU/fix_gpu.cpp
	src/GRANULAR/atom_vec_granular.cpp
	src/GRANULAR/fix_pour.h
	src/KSPACE/Install.sh
	src/KSPACE/fft3d.cpp
	src/KSPACE/fft3d.h
	src/KSPACE/kissfft.h
	src/KSPACE/pppm.cpp
	src/KSPACE/pppm.h
	src/KSPACE/pppm_tip4p.cpp
	src/MAKE/Makefile.openmpi
	src/MAKE/Makefile.serial
	src/MANYBODY/pair_airebo.cpp
	src/MANYBODY/pair_comb.cpp
	src/MANYBODY/pair_eam.cpp
	src/MANYBODY/pair_eim.cpp
	src/MANYBODY/pair_sw.cpp
	src/MANYBODY/pair_tersoff.cpp
	src/MANYBODY/pair_tersoff_zbl.cpp
	src/MOLECULE/atom_vec_angle.cpp
	src/MOLECULE/atom_vec_bond.cpp
	src/MOLECULE/atom_vec_full.cpp
	src/MOLECULE/atom_vec_molecular.cpp
	src/Makefile
	src/Makefile.lib
	src/PERI/atom_vec_peri.cpp
	src/USER-CG-CMM/Install.sh
	src/USER-IMD/README
	src/USER-IMD/fix_imd.cpp
	src/USER-IMD/fix_imd.h
	src/USER-SMD/Install.sh
	src/atom_vec_atomic.cpp
	src/atom_vec_charge.cpp
	src/comm.cpp
	src/finish.cpp
	src/fix_box_relax.cpp
	src/fix_deposit.cpp
	src/fix_spring_self.cpp
	src/fix_store_state.cpp
	src/fix_wall.cpp
	src/fix_wall_reflect.cpp
	src/input.cpp
	src/input.h
	src/memory.cpp
	src/memory.h
	src/pair_lj_cut.cpp
	tools/restart2data.cpp
2011-12-31 19:07:46 -05:00
8a282d8b8a updates to restart2data
- fix segfault when running without arguments
- add/correct support for pair styles:
   coul/diel, coul/long, gauss, gauss/cut, lj/sdk,
   lj/sdk/coul/long, rebo, tersoff/table
- avoid printing NULL pointers
2011-12-12 22:37:35 -05:00
5a03365db1 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7179 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-10-24 17:46:58 +00:00
4c107e07a4 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7017 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-09-30 16:03:38 +00:00
b806706398 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6972 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-09-15 14:26:58 +00:00
1ce29fc9a1 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6656 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-08-08 23:10:20 +00:00
5d163c9505 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6469 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-06-23 14:09:25 +00:00
c6d9d554f0 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6468 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-06-23 13:43:02 +00:00
fe953700a5 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6461 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-06-22 13:41:43 +00:00
b303b5b852 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6338 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-06-08 20:23:37 +00:00
2be078632d git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6052 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-05-02 15:02:09 +00:00
e2d5478a6c git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5951 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-04-15 22:57:52 +00:00
17f9667059 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5933 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-04-13 21:40:28 +00:00
b2f9d754c2 Merge branch 'master' into lammps-icms 2011-02-16 08:59:23 -05:00
8b7754f68a git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5646 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-02-15 19:26:53 +00:00
de4585af19 use preprocessing to include BIGINT_FORMAT
this reverts the output for bigint_t type variables
to the same style that is used now in LAMMPS and
avoids using sprintf().
2011-02-01 10:38:55 -05:00
fbe0cbe012 add some missing big integer format descriptors
synchronize BIGINT definition and format with lmptypes.h
2011-02-01 10:17:39 -05:00
fa493de199 Merge branch 'master' into lammps-icms
Conflicts resolved in following files.
	lib/gpu/cmm_cut_gpu.cpp
	lib/gpu/cmmc_long_gpu.cpp
	lib/gpu/gb_gpu.cpp
	lib/gpu/gb_gpu_memory.cpp
	lib/gpu/lj96_cut_gpu.cpp
	lib/gpu/lj_cut_gpu.cpp
	lib/gpu/ljc_cut_gpu.cpp
	lib/gpu/ljcl_cut_gpu.cpp
	lib/gpu/pair_gpu_balance.h
	lib/gpu/pair_gpu_device.cpp
	lib/gpu/pair_gpu_device.h
	src/GPU/fix_gpu.cpp
	tools/restart2data.cpp
2011-01-13 13:14:47 -05:00
11e80405e1 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5542 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-01-12 15:28:26 +00:00
e33cf00fb0 Merge branch 'master' into lammps-icms 2011-01-11 10:40:01 -05:00
663cd083d8 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5523 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-01-11 00:43:41 +00:00
a47e493dfd Merge branch 'master' into lammps-icms
Conflicts resolved in:
	doc/Section_commands.html
	src/USER-IMD/fix_imd.cpp
	src/finish.cpp
2011-01-10 10:06:21 -05:00
15c856bcaa git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5502 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-01-07 17:58:43 +00:00
c531b460b4 Merge branch 'master' into lammps-icms 2011-01-05 12:36:24 -05:00
b414a4a22a git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5464 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-01-04 19:49:15 +00:00
a69ca213b6 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5461 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-01-04 19:22:15 +00:00
dd111e21d2 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5460 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-01-04 19:21:40 +00:00
1226d999b4 Merge branch 'master' into lammps-icms 2010-11-25 10:24:09 -05:00
d4ada34579 Merge branch 'master' into lammps-icms
merge in gpu pair style update from master.
needed to resolve lots of whitespace conflicts.
2010-11-24 12:31:02 -05:00
d9b78fef10 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5293 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2010-11-24 14:10:29 +00:00
8ba792f112 Updating restart2data.cpp to reflect new GPU pair styles --- all changes courtesy of Axel.
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5292 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2010-11-23 21:28:42 +00:00
a37ad5addf add support for dpd/tstat 2010-11-23 15:57:15 -05:00
17e6ef5f97 add a missing gayberne/omp entry 2010-11-23 15:37:39 -05:00
dd247a869a restart2data support for gpu accelerated styles 2010-11-20 15:17:43 -05:00
b6444e36cd Merge branch 'master' into lammps-icms 2010-11-18 13:29:46 -05:00
c5c8dbbf3f git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5251 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2010-11-17 18:44:00 +00:00
b956107fc6 Merge branch 'master' into lammps-icms 2010-10-03 16:52:05 -04:00
a4b092afd8 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@4801 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2010-09-16 14:19:00 +00:00