Commit Graph

23492 Commits

Author SHA1 Message Date
60e237a39f Fixing text 2020-09-24 20:32:40 -06:00
9e520b63c6 Fixing text 2020-09-24 20:31:33 -06:00
88b0963cf8 Deleting files 2020-09-24 20:24:34 -06:00
0511bc38e0 Updated 2 species example to use an existing potential, and generated new log files for each case. 2020-09-24 20:22:10 -06:00
9b28280668 Cleaned up the #include statements section 2020-09-24 19:27:53 -06:00
f40ae1ad0c Replacing pow() with MathSpecial::square() 2020-09-24 18:05:13 -06:00
476d58628f Initializing variables to (nullptr) 2020-09-24 17:40:54 -06:00
01e4f51455 Changing atof() to utils::numeric() 2020-09-24 17:25:59 -06:00
ff3637c88c Added the line: delete [] energy_coh_in 2020-09-24 16:58:14 -06:00
33bf8270a6 Editing system sizes and run times 2020-09-24 16:34:16 -06:00
a6e18eaf42 Deleting files 2020-09-24 16:23:25 -06:00
c997925584 Commented out dump commands in input files, edited in.cascade_SiSi to read from /potentials/SiC.tersoff.zbl, and deleted Si.tersoff.zbl file 2020-09-24 16:21:51 -06:00
808b8bf431 Merge branch 'master' of github.com:lammps/lammps 2020-09-24 16:12:50 -06:00
6675371d6b Removed elec_drag folder 2020-09-24 15:40:56 -06:00
7d0650a09c Delete fix_elec_drag.h 2020-09-24 15:28:14 -06:00
0b7e5601e0 Delete fix_elec_drag.cpp 2020-09-24 15:27:56 -06:00
28812b1ea7 Merge pull request #2381 from akohlmey/collected-small-changes
Collected small changes
2020-09-24 16:17:28 -04:00
08270c3498 update container descriptions 2020-09-24 02:17:26 -04:00
02c1480546 update README in examples/COUPLE/simple 2020-09-24 02:17:11 -04:00
ac78f8f1e1 update examples/COUPLE/simple sources to work with the current version of LAMMPS 2020-09-24 01:30:34 -04:00
f5635208e3 Modified the fix_elec_drag.* name to fix_electron_stopping_fit.* to align with and distinguish from existing fix_electron_stopping.* 2020-09-23 17:14:14 -06:00
b350dce573 improve error messages for variables and python commands 2020-09-23 19:02:55 -04:00
6392d24411 Added an electronic stopping fix (fix_elec_drag.*) to USER-MISC/, with corresponding examples in examples/USER/misc/ 2020-09-23 16:36:12 -06:00
2f8a5ddd1f xindy doesn't seem to be required (and is not available on CentOS 8) 2020-09-23 17:13:09 -04:00
85fe94a6dd Merge pull request #2388 from jrgissing/molecule_fragments_check
molecule: findfragments correction
2020-09-23 15:54:37 -04:00
790f636523 rephrase 2020-09-23 15:45:29 -04:00
b6d98707ec molecule: revert overzealous error checking 2020-09-23 11:23:10 -04:00
2b30661b07 molecule: correctly update docs 2020-09-23 10:46:23 -04:00
1be766c8cd molecule fragment: let's add more checks 2020-09-23 10:37:33 -04:00
ed3975054a fix typo 2020-09-23 10:30:19 -04:00
e29f838121 also add error checks 2020-09-23 10:28:48 -04:00
88b8461e0f the right molecule fragment fix 2020-09-23 10:19:38 -04:00
343932f220 document -DLAMMPS_TRAP_FPE 2020-09-23 09:38:07 -04:00
ab4dc9c343 Merge pull request #2378 from junghans/cmake_install_fix
cmake: do not install mpi.h without library
2020-09-22 21:37:57 -04:00
20027cc7ec Merge pull request #2390 from Vsevak/hip_pppm_fix
Fix atomicAdd in PPPM/GPU for the HIP backend
2020-09-22 18:04:12 -04:00
9df1bb4db0 remove obsolete makefiles. Makefile.xk7 is on death watch but Blue Waters still has such nodes 2020-09-22 17:47:14 -04:00
459d51bbea Do not disable atomics for HIP
atomics are disabled for NVIDIA 1.0 cards, which should not affect ROCm HIP
2020-09-22 22:34:24 +03:00
7b4304577a add -std=c++11 flag to compilation of all .cpp files on Linux 2020-09-22 10:58:54 -04:00
2d7b6a9008 remove dead code 2020-09-22 10:12:59 -04:00
b878403aee update a few more singularity container definitions for doc build requirements 2020-09-22 06:01:34 -04:00
1eebdcbd03 fix obvious bugs 2020-09-22 05:34:29 -04:00
b876f451f8 make compiler choice overridable 2020-09-22 05:34:12 -04:00
f186eb7005 be more selective about which elements not to display
we only want to skip the redundant User-Documentation and Programmer-Documentation captions
2020-09-21 22:41:19 -04:00
54aacc47ea add section about citing LAMMPS 2020-09-21 22:40:36 -04:00
cc8b042abf cmake: export LAMMPS_LIB_NO_MPI for serial version 2020-09-21 12:54:56 -06:00
fbcb888ec0 cmake: do not install install mpi.h 2020-09-21 12:41:34 -06:00
51b900b043 Merge remote-tracking branch 'origin/master' into cmake_install_fix 2020-09-21 12:39:51 -06:00
36fdba32e7 Merge pull request #2382 from junghans/cmake_install_fix_2
cmake: install missing utils.h
2020-09-21 13:29:29 -04:00
7eab154786 one-line bug when checking for molecule fragments 2020-09-21 11:01:04 -04:00
a1407de09d have make yes/no package terminate with error status for non-existing packages
this closes #2387
2020-09-21 07:09:13 -04:00