Commit Graph

1541 Commits

Author SHA1 Message Date
30929d95e2 Merge pull request #1342 from dsbolin/gran_mods
New generalized granular pair style added
2019-03-29 10:37:07 -04:00
eab939af23 add a note about the lack of stress/atom in USER-INTEL to the manual 2019-03-28 12:47:06 -04:00
2fa6e913ef Merge branch 'master' into gran_mods 2019-03-28 11:46:44 -04:00
5210c4c3a4 cosmetic reformatting of new GRANULAR files 2019-03-27 16:58:14 -06:00
e63d2cee87 Merge pull request #1375 from akohlmey/install-python-for-cmake
Refactor python module installer and add install-python target to CMake
2019-03-27 16:47:25 -04:00
03e86c4d17 update python module installation instructions 2019-03-26 22:49:21 -04:00
9d22f82ba7 update PyLAMMPS documentation/tutorial for CMake and the refactored installation process 2019-03-26 22:42:09 -04:00
5a6a8a9e57 Merge pull request #1379 from lammps/hyper
Hyper-dynamics update
2019-03-26 16:30:37 -04:00
19d25203ad add min_style spin to commands overview 2019-03-25 21:05:13 -04:00
36b645d238 add min_spin page to toclist 2019-03-25 20:46:42 -04:00
81a4d293db Commit4 JT 032519
- corrected documentation (errors in min_spin.txt and
min_modify.txt)
- changed the code accordingly
2019-03-25 15:43:58 -06:00
7a00997a14 Commit2 JT 032519
- added equations for documentation
- updated examples (not calling fix nve/spin)
- replaced error message by warning in all pair/spin
2019-03-25 14:03:28 -06:00
a726362888 Commit JT 032519
- adding all min files into new branch
- preparing branch for pull request of spin minimizer
2019-03-25 12:57:42 -06:00
2f20581b29 Merge pull request #1374 from akohlmey/collected-small-fixes
Collected small changes for the next patch release
2019-03-25 13:15:45 -04:00
5554deda39 fixed 2 spelling errors 2019-03-25 10:07:07 -06:00
881cc71a44 Merge branch 'master' into hyper 2019-03-25 09:21:09 -06:00
3464464ea9 Update kim example query and log files 2019-03-22 20:20:47 -05:00
22be3bd37e fix spelling error and add false positives for spellchecking 2019-03-22 17:33:16 -04:00
f69173f410 partial documentation update 2019-03-22 17:25:03 -04:00
52f9e4a960 allow overriding the location of the molfile plugin headers with CMake 2019-03-22 14:11:02 -04:00
2dbc2c5916 fix spelling issues in documentation and some minor clarification 2019-03-19 16:04:53 -04:00
1c3e3ce548 add kim_query command to commands list 2019-03-19 15:57:19 -04:00
38c373a0e4 integrate new kim_query command into the documentation environment 2019-03-19 15:42:35 -04:00
2bac365081 support old style PDF build for new pair style granular 2019-03-15 15:51:08 -04:00
a7a1fd4ee5 remove reference to USER-OMP version of fix wall/gran 2019-03-15 15:50:44 -04:00
b6459b3f74 Merge branch 'master' into gran_mods 2019-03-15 14:30:36 -04:00
8845a1a0ae whitespace cleanup (remove ctrl-m, trailing whitespace) 2019-03-15 14:20:10 -04:00
3f0f2383b4 fix spelling and record false positives 2019-03-15 14:18:04 -04:00
5608f87c15 bond/react:unfix_deletes_internal_groups 2019-03-13 21:55:17 -06:00
aca8ce1f53 Merge branch 'master' into hyper
sync with GH master
2019-03-13 12:19:06 -06:00
2cc35ee777 A few additional enhancements to pair granular and fix wall granular option:
- NULL option for tangential stiffness, to set it based on shear modulus
- calculation of effective shear moduli from elastic moduli and Poisson's ratio
- updates to doc page example syntax
2019-03-13 00:42:08 -06:00
e0c935b52d Additional changes to pair_granular:
-added mindlin and mindlin/rescale tangential model options
-torque from tangential force is now applied at the same point on both contacting particles
-updated doc page to reflect changes above
2019-03-11 14:28:44 -06:00
4ee98d18da Fixed missing reference in pair_granular doc page 2019-03-06 14:15:19 -07:00
b628e3b1b6 Update openkim.org urls in various places 2019-03-06 10:26:03 -06:00
f0ec2e3279 refactoring of global and local hyper, including amended doc pages 2019-03-01 18:47:34 -07:00
5486896876 Merge pull request #1350 from akohlmey/next-patch-release
Step version string for next patch release
2019-02-28 17:56:51 -05:00
14e6c126a8 Merge pull request #1314 from charlessievers/OptimizedDynamicalMatrix
add command to compute the Dynamical Matrix
2019-02-28 17:08:36 -05:00
50fef541c2 add x-ref 2019-02-28 15:50:59 -05:00
1d2eab5e1b update attribution information in Package details documentation 2019-02-28 15:26:36 -05:00
16946d8c6d integrate dynamical_matrix command into LAMMPS manual 2019-02-28 14:45:07 -05:00
326a97624e Merge pull request #1317 from ornladios/adios2-master
USER-ADIOS package with ADIOS 2.x
2019-02-27 17:24:12 -05:00
b60f0f754c small tweaks to USER-ADIOS docs 2019-02-27 17:18:08 -05:00
6bf9c06a5a Step version string for next patch release 2019-02-27 16:19:20 -05:00
9185f28a12 correct compute group/group documentation for use with EAM styles 2019-02-27 16:08:41 -05:00
9178b9446a remove trailing whitespace 2019-02-26 19:50:50 -05:00
d76569c033 Merge pull request #1320 from eofetis/manual-pdf-support
Add support for Sphinx+PDF+MathJax
2019-02-22 15:10:13 -05:00
e6df92e65a Merge pull request #1011 from ellio167/kim-v2-update
KIM v2 update
2019-02-21 20:06:59 -05:00
e6a7c8b03b Merge pull request #1335 from donatas-surblys/langevin-tally-zero
correct fix langevin with tally yes zero yes
2019-02-21 20:06:44 -05:00
3ad268739b Add dump adios to PDF build. Update example config with better documentation 2019-02-20 17:02:48 -05:00
2de01cef45 Dump atom/adios and dump custom/adios command notifications 2019-02-20 16:21:07 -05:00