|
|
6de9c09730
|
Tweaked econs.py
|
2021-12-23 16:35:30 -07:00 |
|
|
|
19d469222a
|
Added test for energy conservation
|
2021-12-23 16:28:25 -07:00 |
|
|
|
addb8948f9
|
Able to run dynamics smoothly, does not conserve energy, but maybe that is a feature
|
2021-12-23 15:01:41 -07:00 |
|
|
|
c69edde55c
|
Eliminated several undefined variables
|
2021-12-10 18:30:44 -07:00 |
|
|
|
591af3f560
|
Eliminated obvious but hard to find error in neighbor list request
|
2021-10-29 07:49:15 -06:00 |
|
|
|
6d5506353b
|
Eliminated a few mistakes,s till not working
|
2021-10-24 15:45:24 -06:00 |
|
|
|
f41d650294
|
Added non-working pair script
|
2021-10-03 17:59:33 -06:00 |
|
|
|
0a4e85a1f3
|
Added README.grid
|
2021-08-26 11:58:39 -06:00 |
|
|
|
ea3c89165a
|
Resolved memory management issue exposed by RCB in in.grid.test
|
2021-08-26 11:52:06 -06:00 |
|
|
|
78f9c7b478
|
Declared victory on compute grid and grid/local
|
2021-08-25 17:52:53 -06:00 |
|
|
|
f473ca498b
|
Created in.grid.local, fixed some problems in src
|
2021-08-22 19:24:23 -06:00 |
|
|
|
1b1f6f29c2
|
Updated grid.py to use sna/grid/local compute, but it seg-faults
|
2021-08-22 18:44:35 -06:00 |
|
|
|
94c97e83a2
|
Added this helper file
|
2021-08-22 18:30:02 -06:00 |
|
|
|
a0197644f0
|
Merge remote-tracking branch 'origin/master' into compute-grid-new
|
2021-07-30 10:04:09 -06:00 |
|
|
|
b9ab0eb607
|
fix broken symbolic links
|
2021-07-28 21:32:52 -04:00 |
|
|
|
f192102da9
|
move examples away from USER-MISC now that the package folder is gone
|
2021-07-24 20:53:23 -04:00 |
|
|
|
d2684a2370
|
Merge branch 'master' into package-reorganization2
|
2021-07-23 07:41:10 -04:00 |
|
|
|
c78d4eab36
|
update standard examples for new style names
|
2021-07-21 22:52:43 -04:00 |
|
|
|
f8f4af471f
|
general rename of files, styles, and keywords from "reax/c", "reax", or "reaxc" to "reaxff"
|
2021-07-21 21:52:25 -04:00 |
|
|
|
d16f751413
|
Merge branch 'master' into package-reorganization2
|
2021-07-21 10:23:04 -04:00 |
|
|
|
cf3bf374fa
|
Merge branch 'master' into refactor-reaxff-parser
|
2021-07-21 00:30:53 -04:00 |
|
|
|
6604508b55
|
Merge branch 'master' into collected-small-changes
|
2021-07-20 19:39:10 -04:00 |
|
|
|
96389213ab
|
Merge pull request #2788 from jtclemm/track-contacts
Track properties of pair interactions
|
2021-07-20 19:38:21 -04:00 |
|
|
|
8a4820a033
|
add data/units comments to example quip potential files
|
2021-07-20 19:31:52 -04:00 |
|
|
|
63794aa698
|
Merge branch 'master' into track-contacts
# Conflicts:
# doc/src/Packages_details.rst
# src/DIELECTRIC/pair_coul_cut_dielectric.h
# src/MISC/fix_pair_tracker.cpp
# src/MISC/fix_pair_tracker.h
# src/MISC/pair_tracker.cpp
# src/MISC/pair_tracker.h
# src/pair_tracker.h
|
2021-07-20 16:19:38 -04:00 |
|
|
|
52156ccb35
|
Merge branch 'master' into package-reorganization2
|
2021-07-19 11:07:42 -04:00 |
|
|
|
15b3b6445e
|
Updated tests and documentation, added warning message
|
2021-07-19 11:22:06 +01:00 |
|
|
|
b7a17dc25d
|
Added warning message in documentation and dsDNA ring test in examples
|
2021-07-16 12:57:21 +01:00 |
|
|
|
741e13743c
|
Merge branch 'master' into refactor-reaxff-parser
|
2021-07-15 17:23:56 -04:00 |
|
|
|
e99b8ed07c
|
Merge branch 'master' into cg-dna
|
2021-07-15 13:37:24 +01:00 |
|
|
|
0f0059269d
|
Modified data_bonds_post() and calling structure
|
2021-07-15 13:36:40 +01:00 |
|
|
|
2cf00a382e
|
Completed merge to current master
|
2021-07-14 13:47:55 -06:00 |
|
|
|
757e2f8cff
|
Merge branch 'master' into refactor-reaxff-parser
# Conflicts:
# doc/src/fix_qeq_reax.rst
# src/OPENMP/reaxc_bond_orders_omp.h
# src/OPENMP/reaxc_bonds_omp.h
# src/OPENMP/reaxc_forces_omp.h
# src/OPENMP/reaxc_hydrogen_bonds_omp.h
# src/OPENMP/reaxc_init_md_omp.cpp
# src/OPENMP/reaxc_init_md_omp.h
# src/OPENMP/reaxc_multi_body_omp.h
# src/OPENMP/reaxc_nonbonded_omp.h
# src/OPENMP/reaxc_torsion_angles_omp.h
# src/OPENMP/reaxc_valence_angles_omp.h
# src/OPENMP/reaxff_omp.h
# src/Purge.list
# src/QEQ/fix_qeq.cpp
# src/QEQ/fix_qeq.h
# src/QEQ/fix_qeq_dynamic.cpp
# src/QEQ/fix_qeq_fire.cpp
# src/REAXFF/fix_qeq_reax.cpp
# src/REAXFF/reaxc_allocate.h
# src/REAXFF/reaxc_bond_orders.h
# src/REAXFF/reaxc_bonds.h
# src/REAXFF/reaxc_control.h
# src/REAXFF/reaxc_defs.h
# src/REAXFF/reaxc_ffield.h
# src/REAXFF/reaxc_forces.h
# src/REAXFF/reaxc_hydrogen_bonds.h
# src/REAXFF/reaxc_init_md.cpp
# src/REAXFF/reaxc_init_md.h
# src/REAXFF/reaxc_io_tools.cpp
# src/REAXFF/reaxc_io_tools.h
# src/REAXFF/reaxc_list.h
# src/REAXFF/reaxc_lookup.h
# src/REAXFF/reaxc_multi_body.h
# src/REAXFF/reaxc_nonbonded.h
# src/REAXFF/reaxc_reset_tools.h
# src/REAXFF/reaxc_system_props.cpp
# src/REAXFF/reaxc_system_props.h
# src/REAXFF/reaxc_tool_box.h
# src/REAXFF/reaxc_torsion_angles.h
# src/REAXFF/reaxc_traj.cpp
# src/REAXFF/reaxc_traj.h
# src/REAXFF/reaxc_types.h
# src/REAXFF/reaxc_valence_angles.h
# src/REAXFF/reaxc_vector.cpp
# src/REAXFF/reaxc_vector.h
# src/REAXFF/reaxff_api.h
# src/REAXFF/reaxff_defs.h
# src/REAXFF/reaxff_inline.h
# src/REAXFF/reaxff_types.h
# src/text_file_reader.cpp
# src/text_file_reader.h
# unittest/force-styles/tests/atomic-pair-reax_c.yaml
# unittest/force-styles/tests/atomic-pair-reax_c_lgvdw.yaml
# unittest/force-styles/tests/atomic-pair-yukawa_colloid.yaml
|
2021-07-12 14:25:47 -04:00 |
|
|
|
0540ce547b
|
Merge branch 'master' into package-reorganization2
|
2021-07-12 11:45:27 -04:00 |
|
|
|
41a434ae1f
|
fix compilation issues with new/old Intel compilers
|
2021-07-11 14:09:17 -04:00 |
|
|
|
6571a84884
|
move some styles around
|
2021-07-09 16:54:00 -04:00 |
|
|
|
b2a396da3c
|
Merge pull request #2828 from tomswinburne/snap-scale
Adding scale parameter to pair/snap for fix/adapt
|
2021-07-07 16:10:11 -04:00 |
|
|
|
46d5d9724a
|
move interlayer potentials to their own package
|
2021-07-07 15:52:53 -04:00 |
|
|
|
39bd342913
|
Resolved conflict
|
2021-07-07 10:04:05 +01:00 |
|
|
|
71f82e81d7
|
Merge branch 'snap-scale' into fm
|
2021-07-06 17:23:24 +02:00 |
|
|
|
3675bef2b0
|
doc
|
2021-07-06 14:06:27 +02:00 |
|
|
|
4b81802ae8
|
Created new feature branch for PR as per request
|
2021-07-05 16:07:40 +01:00 |
|
|
|
430e7e962f
|
Merge branch 'master' into dielectric-updates
# Conflicts:
# src/DIELECTRIC/Install.sh
# src/DIELECTRIC/pppm_disp_dielectric.cpp
# src/DIELECTRIC/pppm_disp_dielectric.h
|
2021-07-03 15:27:57 -04:00 |
|
|
|
39039d261f
|
Test6
|
2021-07-02 15:37:49 -06:00 |
|
|
|
01475cb3a8
|
Test3
|
2021-07-02 15:35:59 -06:00 |
|
|
|
e102864c2d
|
Test2
|
2021-07-02 15:13:40 -06:00 |
|
|
|
442585313c
|
Test
|
2021-07-02 15:11:14 -06:00 |
|
|
|
cf6570d812
|
Tweaked comments in grid examples
|
2021-07-02 15:06:19 -06:00 |
|
|
|
021e8a404d
|
Updated example data files
|
2021-07-02 12:20:26 -05:00 |
|
|
|
58196d57f1
|
New package DPD-BASIC with pair styles dpd, dpd/tstat, dpd/ext, dpd/ext/tstat
|
2021-07-01 00:51:55 -04:00 |
|