Commit Graph

32784 Commits

Author SHA1 Message Date
af3da50bda add some more versionadded tags, now mostly complete for 2022 2022-09-25 09:41:55 -04:00
971f5672c9 add missing sllod initialization fixes 2022-09-25 07:11:25 -04:00
67a210e6d8 no need to include pair.h 2022-09-25 06:41:51 -04:00
084024cdc3 format 2022-09-25 06:41:37 -04:00
51624fa78d whitespace 2022-09-25 03:55:45 -04:00
3a95a7b973 add utility to detect pending version tags in .. versionadded/changed:: 2022-09-25 03:51:54 -04:00
64b88f2e13 add versionadded/versionchanged markers for features from 15Sep2022 and 3Aug2022 2022-09-25 03:20:29 -04:00
7b7237bdaf try to suppress creating __pycache__ folders in the python source dirs 2022-09-24 22:27:22 -04:00
19a0747aeb add unit test for MLIAP unified 2022-09-24 22:15:29 -04:00
ebf69f2e79 avoid incorrect results with ghostneigh_flag on by skipping contributions from non-local i atoms 2022-09-24 21:09:27 -04:00
0ed0d757ec refactor unified LJ example input to embed the python code into the input 2022-09-24 21:08:43 -04:00
59ca352e48 whitespace 2022-09-24 15:34:41 -04:00
a02ab6eaa1 avoid memory corruption when using mliap unified with ghostneigh_flag == 1 2022-09-24 15:32:25 -04:00
ef8090fdd1 flag *unified* keyword as newly added in the next patch release 2022-09-24 15:31:47 -04:00
bab115e993 apply C++11 virtual/override conventions 2022-09-24 14:48:31 -04:00
1885f7e42d delete redundant memory deallocation 2022-09-24 14:48:13 -04:00
1ad782c050 initialize and (conditionally) free cutghost pointer in base class 2022-09-24 14:47:41 -04:00
058e49696a Added "New in version TBD" to new functions 2022-09-24 12:12:24 -05:00
26e269aacd continued ork on extract_compute unit tests 2022-09-24 12:04:27 -05:00
b37c145352 convert URLs to https where possible, check URLs for bit rot and update or remove 2022-09-24 08:02:18 -04:00
a0caf34d71 update sjplimp's email and homepage 2022-09-24 05:02:53 -04:00
e469c98e9d apply clang-format 2022-09-24 04:39:02 -04:00
a31977ca4c fix typo 2022-09-24 04:24:43 -04:00
46820a90c5 modernize and improve error message handling 2022-09-24 04:12:54 -04:00
caa80ef344 use upper case LAMMPS as the name of the package consistently 2022-09-24 03:45:23 -04:00
5ddb0aeb16 cosmetic changes 2022-09-24 03:44:19 -04:00
f1756eeeee update unified LJ Ar example to include creating the pickle in the input 2022-09-24 03:33:19 -04:00
c7b24cb1e3 always accept "mliappy" and "unified" keywords, but print suitable error if not supported 2022-09-24 03:32:35 -04:00
c581fca39a Merge branch 'develop' into mliappy_unified 2022-09-24 03:07:31 -04:00
49a3be17cb c-library functions should be always present, documented, and lowercase 2022-09-24 03:07:24 -04:00
69627eee8d Merged with fortran-tinkering 2022-09-23 22:11:24 -05:00
8ad478697e Remove trailing whitespace 2022-09-23 17:20:27 -06:00
a3326841ad Add MLIAP NumPy Ta06A example 2022-09-23 17:01:59 -06:00
a94cfe175b add c/python unit tests for lammps_error() 2022-09-23 18:59:29 -04:00
597540dfb4 Merge branch 'mliappy_unified' of github.com:Boogie3D/lammps into mliappy_unified 2022-09-23 16:51:29 -06:00
5aad045686 Improve incompatible python interpreter warning 2022-09-23 16:51:20 -06:00
9eee1bbb5f Fix MLIAP Unified LJ example logs 2022-09-23 16:04:15 -06:00
cc0fc01d1c Implemented extract_compute and started writing unit test for it 2022-09-23 16:23:51 -05:00
86d1aacf7e add function to dispatch LAMMPS errors to library interfaces 2022-09-23 16:28:15 -04:00
0f2a7d3f33 Merge branch 'develop' into fortran-tinkering 2022-09-23 12:41:39 -04:00
d9e2be4b75 updates to the fortran module docs to make it more consistent, fix links, add example similar to C library docs 2022-09-23 12:41:31 -04:00
2a14397318 fix broken link 2022-09-23 11:10:06 -04:00
71c48762fb correct inconsistent spelling of name 2022-09-23 10:33:44 -04:00
6532640362 spelling 2022-09-23 10:23:32 -04:00
ac0080f2df Reintroduced some stashed doc edits 2022-09-23 07:20:49 -05:00
8183a4dfbb change logic to make coverity scan happy 2022-09-23 06:12:56 -04:00
c3e7f8f25a remove unused NEWTON_PAIR template argument 2022-09-23 06:01:25 -04:00
820fab454b style changes 2022-09-23 05:47:41 -04:00
5f5397f61b Added unit tests for x and v 2022-09-22 22:23:31 -05:00
ea8f08c295 update "make install" for cmake to correctly install LAMMPS python module. 2022-09-22 22:44:45 -04:00