Commit Graph

139 Commits

Author SHA1 Message Date
7318dd06d3 simplify 2020-06-26 14:04:38 -04:00
e4a3a518f7 more use of fmtlib and std::string 2020-06-25 22:50:38 -04:00
b0319c2e70 fix missing newline in thermo output. 2020-06-24 21:47:27 -04:00
aa94d3f723 Merge branch 'master' into pair-potential-file-unit-convert 2020-06-24 20:24:51 -04:00
fdf7282030 simplify output creation 2020-06-24 17:38:39 -04:00
1e8ea3af82 add comparisons for pressure (atm vs. bar) 2020-06-23 00:10:46 -04:00
9291d2a9d7 Simplify count_words, add trim_and_count_words
The original count_words function (before it was put into utils::) also trimmed
comments. For compatibility this behaviour was retained at first. However, due
to the name the trimming is not immediatly apparent and many times not
wanted.

Therefore, this commit replaces count_words with an implementation that
just does what it says. If a comment should be trimmed there is a
trim_comment function. For convenience, a trim_and_count_words function was
added and is now used where the old behaviour was needed.
2020-06-04 11:13:37 -04:00
4a2d3e95cb Replace Atom::count_words with utils::count_words 2020-05-20 15:53:19 -04:00
06dcc9e283 Merge branch 'master' into improve-include-consistency
# Conflicts:
#	src/USER-MESO/atom_vec_tdpd.cpp
2019-07-09 14:50:00 -04:00
ce6fa0118a continuing to clean up include file lists 2019-07-04 08:39:17 -04:00
256531a29a put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
5e3a705911 fix bug caused by a parameter shadowing a class variable 2019-06-28 14:28:45 -04:00
fd93c27dcb make valgrind happy by fully initializing line buffer for thermo output 2019-06-17 07:35:30 -04:00
f0ec2e3279 refactoring of global and local hyper, including amended doc pages 2019-03-01 18:47:34 -07:00
d27215b7e1 enable more correct natoms computation when atoms are lost 2018-08-07 15:05:07 -06:00
d8138a5b4c move enum{IGNORE,WARN,ERROR) into Thermo class and use Thermo:: namespace to reference it 2018-05-09 18:11:31 -04:00
e4071d7f46 replace C-style include files with their C++ equivalents 2018-04-27 18:00:24 -04:00
59dbb49cf9 remove trailing whitespace 2018-03-16 12:37:27 -04:00
10d2e7c380 MAINT: DumpNetCDF and DumpNetCDFMPIIO need access to thermo output. 2017-06-08 23:18:54 +02:00
34dbf6b225 do not compute properties twice 2017-05-18 12:45:43 -04:00
26d71b66e4 convert bigint values for bonds/angles/dihedrals/impropers to doubles when evaluating those keywords in variable expressions 2017-05-18 12:41:48 -04:00
f871ecdc67 change to RCB cuts in load-balancing commands, also a new option for fix halt 2017-03-10 15:55:07 -07:00
3a054d1a82 Fix more typos in src files 2017-03-07 00:55:01 -05:00
639ea6c396 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15468 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-08-10 14:59:04 +00:00
6c8d3ed4e8 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15463 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-08-09 14:10:55 +00:00
550be1d512 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15462 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-08-08 19:41:43 +00:00
056ff192c6 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15459 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-08-08 13:47:55 +00:00
38226b8086 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15426 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-08-03 16:09:38 +00:00
e6c5898e53 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15417 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-08-01 21:11:50 +00:00
ce5f174281 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15414 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-08-01 20:35:57 +00:00
3297fbeb26 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15395 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-07-29 14:34:36 +00:00
f2f9fe0a65 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15386 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-07-28 13:43:23 +00:00
ddd85f006c git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15369 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-07-27 14:04:56 +00:00
88812c44fb git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15250 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-07-01 23:31:09 +00:00
50ac419d3f git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15159 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-06-08 23:15:55 +00:00
0bf65758e8 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14698 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-03-01 20:35:24 +00:00
d1a65e5f6a git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14696 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-03-01 18:22:28 +00:00
00fc71e8b8 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14659 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-02-22 17:10:07 +00:00
354e20f431 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14220 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-10-30 20:04:06 +00:00
047be536bc git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13983 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-09-02 20:39:55 +00:00
ce59e32d1c git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13937 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-08-28 20:00:56 +00:00
f7bc08d83d git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13601 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-07-15 21:29:44 +00:00
e1cd500a21 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13008 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-01-30 18:51:56 +00:00
48cd742b52 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12998 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-01-28 17:19:47 +00:00
3337a367c0 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12833 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-12-17 16:07:34 +00:00
a58e9a481f git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12830 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-12-15 15:35:22 +00:00
d30ce3fe1f git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12828 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-12-13 00:42:32 +00:00
f14e5cdce6 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12714 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-11-18 00:15:46 +00:00
560ca5bb7d git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12094 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-06-06 21:37:22 +00:00
45f7542271 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11892 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-05-02 16:36:53 +00:00