Commit Graph

43774 Commits

Author SHA1 Message Date
566a14f52d Pulling 2025-02-10 17:36:49 +02:00
2c1cd2ed04 Corrected minor rst syntax errors 2025-02-10 17:36:00 +02:00
54790d6095 Added a note about mic and pbc in the documentation of pimdb. 2025-02-10 17:21:06 +02:00
63b5e46bf0 Merge branch 'bosonic-pimd-langevin' of https://github.com/yotamfe/lammps into bosonic-pimd-langevin
Conflicts:
	src/REPLICA/fix_pimdb_langevin.cpp
2025-02-10 15:07:25 +02:00
a67f67607c Added synch_energies parameters to pimdb/langevin 2025-02-10 15:05:11 +02:00
d9d24300a4 add support for ellipsoid regions 2025-02-10 00:05:42 -05:00
4cab0bfe1a implement all open face cases for cylinder regions 2025-02-09 22:19:03 -05:00
0de9da709c add support for moving regions and open faced regions 2025-02-09 18:25:14 -05:00
05521d38d9 initialization bug 2025-02-09 15:26:07 -05:00
6bd2e0e496 update error messages to use new Error class APIs 2025-02-09 10:53:03 -05:00
31697bac8d correct copy-n-modify omission 2025-02-09 10:22:55 -05:00
e00e215f99 add support to prism regions to be exported to VMD 2025-02-09 10:16:30 -05:00
7cf3ff588e include table with impropers in fix_adapt.rst 2025-02-09 16:54:15 +02:00
d11c8b3e1e Update text for improper style in fix_adapt.rst
Update text though a table with the potentials is not included
2025-02-09 15:08:02 +02:00
fe3c8487de implement check_itype in improper_hybrid.cpp 2025-02-09 14:48:10 +02:00
c0ef702af5 define chech_itype in improper_hybrid.h 2025-02-09 14:46:18 +02:00
f7a43b94a6 fix error: ‘else’ without a previous ‘if’ 2025-02-09 14:39:48 +02:00
e4a16556db implement the actual code to adapt improper parameters in fix_adapt.cpp 2025-02-09 14:26:28 +02:00
5557e03e54 add hint about setting top molecule in VMD 2025-02-08 23:26:43 -05:00
3cd028fd01 refactor command to be more flexible and capable 2025-02-08 22:52:19 -05:00
f693577262 add versionadded tag 2025-02-08 18:30:00 -05:00
0a8e2f923d add to .gitignore 2025-02-08 18:29:27 -05:00
8a87a6068c use lighter color "silver" 2025-02-08 18:23:57 -05:00
c7db4e9e19 add docs for region2vmd command 2025-02-08 18:06:32 -05:00
95858bccc6 add region2vmd command 2025-02-08 18:06:12 -05:00
8791b29aa2 give Region2VMD class access to protected members of region style classes 2025-02-08 18:05:57 -05:00
ea973e1d6c Update region.rst 2025-02-08 20:57:45 +02:00
424c694b6b update region.rst 2025-02-08 20:56:12 +02:00
49b5e89258 Update unit test in improper-fourier.yaml 2025-02-08 19:06:08 +02:00
e954bdfc14 implement extract in improper_fourier.cpp 2025-02-08 19:04:43 +02:00
2a2a7a3113 define extract in improper_fourier.h 2025-02-08 19:01:56 +02:00
66117414dd implement extract in improper_amoeba.cpp 2025-02-08 18:56:38 +02:00
38d28fb426 define extract for improper amoeba 2025-02-08 18:55:33 +02:00
098bb4b3c8 flag development version 2025-02-08 09:08:43 -05:00
314d0a0e61 only support Python version 3.6 or later. Update and correct docs and README 2025-02-08 05:54:26 -05:00
599ff11eb0 remove compatibility for compiling LAMMPS with Python 2.x and Python 3.5 and older 2025-02-08 05:05:00 -05:00
792144f12e Merge branch 'collected-small-changes' of github.com:akohlmey/lammps into collected-small-changes 2025-02-07 21:54:58 -05:00
86f7f6da98 Add check that Python 3 is required 2025-02-07 21:52:17 -05:00
8a1744c038 Updates to the instructions for building the manual. 2025-02-07 21:51:37 -05:00
b188cdc044 add check for Python version. Require minimum of Python 3.6 (Sphinx requires 3.8) 2025-02-07 20:51:50 -05:00
6eddb3a33f various minor tweaks and reformatting for CMake scripts 2025-02-07 20:50:14 -05:00
61a2db4715 revise and expand global README file 2025-02-07 19:47:05 -05:00
1a636acf81 simplify / optimize 2025-02-07 07:34:32 -05:00
d384de354a Update unit test in improper-class2.yaml 2025-02-07 09:31:28 +02:00
26e1b5d101 implement extract in improper_class2.cpp 2025-02-07 09:29:41 +02:00
909796b858 define extract for improper class2 2025-02-07 09:28:18 +02:00
ab6668031f explain some more about transition to C++17 2025-02-06 20:55:40 -05:00
d22533350a update copyright year 2025-02-06 20:55:23 -05:00
c9f41f9d90 explain more steps of the release process related to building packages 2025-02-06 20:55:11 -05:00
a547b9a417 do not mention rebasing 2025-02-06 15:00:54 -05:00