Commit Graph

43774 Commits

Author SHA1 Message Date
a4f02fbad3 handle the case when pair-wise cutoff varies and neighbor list is not sufficient 2025-01-14 10:04:16 -05:00
b27aa31baa fix whitespace 2025-01-14 22:35:56 +10:00
276b8d9c93 streamline Lepton variable update process with ptr-vectors 2025-01-14 22:31:42 +10:00
1f7533029b deduplicate force and torque calculations 2025-01-14 22:08:16 +10:00
af1f442b97 increment bugfix for "inputs local" 2025-01-14 07:06:37 -05:00
edb068c43f Merge pull request #4426 from akohlmey/update-to-fmtlib-11.1
Update embedded fmtlib copy to version 11.1
2025-01-14 01:24:57 -05:00
e682f3d3e5 work on docs 2025-01-14 01:19:25 -05:00
783d21c19b these functions do not create errors or throw exceptions 2025-01-14 00:55:48 -05:00
a50343077d Merge remote-tracking branch 'github/develop' into python_computes 2025-01-14 00:53:19 -05:00
31d1addfad Merge pull request #4434 from akohlmey/collected-small-changes
Collected small changes and fixes
2025-01-14 00:41:10 -05:00
7b9f7be485 replace vecs with arrays since size known at compile-time; make phi and dphi flagging uniform 2025-01-14 14:47:33 +10:00
7c8c8c9d01 update patch for WHAM code 2025-01-13 22:07:44 -05:00
b56b8a016a Merge pull request #2 from akohlmey/efield_lepton_updates
Fix efield/lepton updates
2025-01-13 20:40:17 -05:00
c2868c448e Merge remote-tracking branch 'github/develop' into collected-small-changes 2025-01-13 20:34:14 -05:00
754517dcf6 Merge branch 'collected-small-changes' of github.com:akohlmey/lammps into collected-small-changes 2025-01-13 20:32:01 -05:00
6d7926a026 add missing lammps_expand() function 2025-01-13 19:13:34 -05:00
663f812799 fix inconsistent backquotes 2025-01-13 19:05:04 -05:00
55a3b28f7d replace CR-LF with LF 2025-01-13 16:19:40 -05:00
8705a14b35 create logs for example input 2025-01-13 16:18:24 -05:00
ec669676d0 remove unused variables 2025-01-13 16:11:14 -05:00
742c869534 Merge branch 'develop' into gsalkuin/develop 2025-01-13 16:08:18 -05:00
be048fc636 cosmetic changes 2025-01-13 16:01:18 -05:00
ddff545a4c Merge pull request #4431 from Becksteinlab/imd-v3-integration
Interactive Molecular Dynamics [IMD] Version 3 implementation
2025-01-13 15:59:41 -05:00
1d2f42dce9 Merge branch 'develop' into develop 2025-01-13 14:24:22 -06:00
2a5e20c1c1 Merge remote-tracking branch 'origin/develop' into hybrid-scaled-peratom 2025-01-13 12:20:53 -07:00
dd8cc3ebdd Merge remote-tracking branch 'upstream/develop' into develop 2025-01-13 12:18:51 -07:00
1d1320f648 Merge remote-tracking branch 'origin/develop' into python_computes 2025-01-13 10:51:33 -07:00
83a73ba0b9 library: add API for compute clearstep and addstep 2025-01-13 10:51:19 -07:00
62aa803d53 order list of removed commands and packages in reverse order of their removal date
also add an (automatic) table of contents simplify finding something
2025-01-13 12:03:31 -05:00
2898592bb4 Merge branch 'develop' of https://github.com/yotamfe/lammps into bosonic-pimd-langevin 2025-01-13 17:45:11 +02:00
f3b1f56fa8 Merge pull request #1 from BarakHirshberg/bosonic-pimd-langevin
Bosonic pimd langevin
2025-01-13 17:38:25 +02:00
795a5daade removed html folder which was added by accident 2025-01-13 17:37:13 +02:00
a5eb0dc105 went over text 2025-01-13 17:22:56 +02:00
edca6eb4db this is a lost cause 2025-01-13 14:55:48 +00:00
60583c5e35 Merge branch 'bosonic-pimd-langevin' of https://github.com/yotamfe/lammps into bosonic-pimd-langevin 2025-01-13 16:48:16 +02:00
a5e28252cf add referece for virial works for bosons 2025-01-13 16:47:30 +02:00
a22c58cd47 add missing update to invoked_bonds in ComputeReaxFFAtomKokkos 2025-01-13 00:17:05 -07:00
dc7f28c4c0 Merge branch 'develop' into add-error-explanations 2025-01-13 01:27:34 -05:00
77d8942589 Merge branch 'develop' into group-bitmap-accessor 2025-01-13 01:08:47 -05:00
686326a999 Merge remote-tracking branch 'github/develop' into collected-small-changes 2025-01-13 01:05:48 -05:00
528770f07d Merge pull request #4344 from lammps/cmake-cpp-std-deprecation
Prepare development branch for requiring C++17 and deprecating GNU make support for some packages
2025-01-13 01:05:07 -05:00
d692a99e4d print PyLammps deprecation warning only once and only from MPI rank 0 2025-01-13 00:04:14 -05:00
dd6fea3fcd Merge branch 'develop' into cmake-cpp-std-deprecation 2025-01-12 23:54:50 -05:00
e20f3ec874 macOS does not like forward declarations for standard C++ classes 2025-01-12 23:50:33 -05:00
f50edb5a38 Merge pull request #4369 from rbberger/deprecate_pylammps
Python interface updates
2025-01-12 23:30:22 -05:00
0aadc4cf46 use mutex to avoid race condition when accessing thermo data during run 2025-01-12 23:27:17 -05:00
78850efaed also warn that KOKKOS will end support for legacy builds in Summer 2025 2025-01-12 21:57:25 -05:00
7c990f8b0e improve wording 2025-01-12 21:56:54 -05:00
2df402c4ff Merge branch 'develop' into cmake-cpp-std-deprecation 2025-01-12 21:47:02 -05:00
906117ff47 We no longer support Intel icc version 19 or older. Clean up checks/flags. 2025-01-12 21:46:04 -05:00